KEGG   Homo sapiens (human): 283989
Entry
283989            CDS       T01001                                 
Symbol
TSEN54, PCH2A, PCH4, PCH5, SEN54L, sen54
Name
(RefSeq) tRNA splicing endonuclease subunit 54
  KO
K15326  tRNA-splicing endonuclease subunit Sen54
Organism
hsa  Homo sapiens (human)
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsa03016]
    283989 (TSEN54)
Transfer RNA biogenesis [BR:hsa03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    283989 (TSEN54)
SSDB
Motif
Pfam: tRNA_int_end_N2 tRNA_int_endo_N
Other DBs
NCBI-GeneID: 283989
NCBI-ProteinID: NP_997229
OMIM: 608755
HGNC: 27561
Ensembl: ENSG00000182173
UniProt: Q7Z6J9
Structure
Position
17:75516528..75524735
AA seq 526 aa
MEPEPEPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCRE
ELWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL
LECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPY
ERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQC
PEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQ
ISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAA
QFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLLSPGQASSPAVV
LQHISVLQTTHLPDGGARLLEKSGGLEIIFDVYQADAVATFRKNNPGKPYARMCISGFDE
PVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPQDVGH
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggagcccgagcccgagcccgcggccgtggaggttcccgcggggcgcgtgctcagcgcc
cgggagctcttcgccgcccgctcgcggtcgcagaagctgccccagcgctcgcatggcccc
aaggactttctgcccgacggctcggcagctcaggccgagcggctgcgccggtgccgggaa
gagctctggcagctgctggcagagcagcgcgtggagcgcctgggcagcttggtggctgcc
gagtggaggccagaagagggcttcgtggagttgaagtctcccgcgggcaaattctggcag
accatgggcttctcagagcagggccggcagcgccttcacccggaagaggccttgtatctt
ctggagtgtggctccatccacctcttccaccaagacctgccactgtctatccaggaagct
taccagctgctgctgaccgaccacactgtgaccttcctgcagtaccaggtcttcagccac
ctgaagaggttgggttatgtggttcgacgattccaaccaagctctgtcctgtccccgtat
gagaggcagcttaacctggatgccagcgtgcagcacttggaggatggagatggcaagaga
aagaggagcagctccagccctcggtccattaataagaaggccaaggccctggacaactcc
ctgcaacccaagagtctggcagcctccagcccacctccctgcagccagcccagccaatgc
ccagaggagaaaccccaggagtcaagccccatgaagggcccagggggcccctttcagctt
ctggggtccctgggccccagccctggcccggccagggagggggtggggtgcagctgggag
agtggcagagccgagaacggagtcacgggagccggtaagcggcgctggaacttcgagcag
atctccttccccaacatggcttcagacagccgccacacccttctgcgcgccccagcccca
gagctgctcccggccaacgtggctgggcgggagacagacgctgagtcctggtgccagaag
ctgaaccagcgcaaggagaagctctccaggcgggaacgggagcaccacgcggaggccgcg
cagttccaggaagatgtcaacgccgatcccgaggtgcagcggtgctccagctggcgggag
tacaaggagctgctgcagcggcggcaggtgcagaggagccagcgccgggcccctcacctg
tggggccagcccgtcaccccgctgctgagtcctggccaggccagctccccagccgtggtc
cttcagcatatctctgtgctgcagacaacacaccttcctgatggaggtgcccggctgttg
gagaagtctgggggcttggaaatcatctttgatgtttaccaggccgacgctgtggccaca
ttccgaaagaataaccctggcaaaccctatgcccggatgtgcattagtggatttgatgag
cctgtcccagacctctgcagcctcaagcggttgtcttaccagagtggggatgtccctctg
atctttgccctggtggatcatggtgacatctccttctacagcttcagggacttcacgttg
ccccaggatgtggggcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (5)   
   KEGG DISEASE (1)   
   OMIM (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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