KEGG   Homo sapiens (human): 3192
Entry
3192              CDS       T01001                                 
Symbol
HNRNPU, DEE54, EIEE54, GRIP120, HNRNPU-AS1, HNRPU, SAF-A, SAFA, U21.1, hnRNP_U, pp120, C1orf199, NCRNA00201
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
  KO
K12888  heterogeneous nuclear ribonucleoprotein U
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Disease
H00606  Early infantile epileptic encephalopathy
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    3192 (HNRNPU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    3192 (HNRNPU)
Spliceosome [BR:hsa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    3192 (HNRNPU)
SSDB
Motif
Pfam: AAA_33 SPRY SAP SRP54 AAA_18
Other DBs
NCBI-GeneID: 3192
NCBI-ProteinID: NP_114032
OMIM: 602869
HGNC: 5048
Ensembl: ENSG00000153187
UniProt: Q00839 Q96BA7
Structure
Position
1:complement(244850297..244864543)
AA seq 825 aa
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSL
DLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGDQMELGEENGAAGAADSGP
MEEEEAASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAA
KEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGKKKAEGGGGGGRPGAPAAGDGKTEQKGG
DKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK
ISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVR
IGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELS
YAKNGQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVP
LEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVA
GFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQ
RKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKE
EAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFR
GGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGRGSYSNRGNYNRGGMPNRG
NYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgagttcctcgcctgttaatgtaaaaaagctgaaggtgtcggagctgaaagaggagctc
aagaagcgacgcctttctgacaagggtctcaaggccgagctcatggagcgactccaggct
gcgctggacgacgaggaggccgggggccgccccgccatggagcccgggaacggcagccta
gacctgggcggggattccgctgggcgctcgggagcaggcctcgagcaggaggccgcggcc
ggcggcgatgaagaggaggaggaagaggaagaggaggaggaaggaatctccgctctggac
ggcgaccagatggagctaggagaggagaacggggccgcgggggcggccgactcgggcccg
atggaggaggaggaggccgcctcggaagacgagaacggcgacgatcagggtttccaggaa
ggggaagatgagctcggggacgaagaggaaggcgcgggcgacgagaacgggcacggggag
cagcagcctcaaccgccggcgacgcagcagcaacagccccaacagcagcgcggggccgcc
aaggaggccgcggggaagagcagcggccccacctcgctgttcgcggtgacggtggcgccg
cccggggcgaggcagggccagcagcaggcgggaggtaagaagaaggcggaaggcggcgga
ggcggcggtcgccccggggctccggcggcgggggacggcaaaacagaacagaaaggcgga
gataaaaagaggggtgttaaaagaccacgagaagatcatggccgtggatattttgagtac
attgaagagaacaagtatagcagagccaaatctcctcagccacctgttgaagaagaagat
gaacacttcgatgacacagtggtttgtcttgatacttataattgtgatctacattttaaa
atatcaagagatcgtctcagtgcttcttcccttacaatggagagttttgcttttctttgg
gctggaggaagagcatcctatggtgtgtcaaaaggcaaagtgtgttttgagatgaaggtt
acagagaagatcccagtaaggcatttatatacaaaagatattgacatacatgaagttcgt
attggctggtcactaactacaagtggaatgttacttggtgaagaagaattttcttatggg
tattctctaaaaggaataaaaacatgcaactgtgagactgaagattatggagaaaagttt
gatgaaaatgatgtgattacatgttttgctaactttgaaagtgatgaagtagaactctcg
tatgctaagaatggacaagatcttggcgttgccttcaaaatcagtaaggaagttcttgct
ggacggccactgttcccgcatgttctctgccacaactgtgcagttgaatttaattttggt
cagaaggaaaagccatattttccaatacctgaagagtatactttcatccagaacgtcccc
ttagaggatcgagttagaggaccaaaggggcctgaagagaagaaagattgtgaagttgtg
atgatgattggcttgccaggagctggaaaaactacctgggttactaaacatgcagcagaa
aatccagggaaatataacattcttggcacaaatactattatggataagatgatggtggca
ggttttaagaagcaaatggcagatactggaaaactgaacacactgttgcagagagccccc
cagtgtcttgggaaatttattgagattgctgcccgaaagaagcgaaattttattctggat
cagacaaatgtgtctgctgctgcccagaggagaaaaatgtgcctgtttgcaggcttccag
cgaaaagctgttgtagtttgcccaaaagatgaagactataagcaaagaacacagaagaaa
gcagaagtagaggggaaagacctaccagaacatgcggtcctcaaaatgaaaggaaacttt
accctcccagaggtagctgagtgctttgatgaaataacctatgttgaacttcagaaggaa
gaagcccaaaaactcttggagcaatataaggaagaaagcaaaaaggctcttccaccagaa
aagaaacagaacactggctcaaagaaaagcaataaaaataagagtggcaagaaccagttt
aacagaggtggtggccatagaggacgtggaggattcaatatgcgtggtggaaatttcaga
ggaggagcccctgggaatcgtggcggatataataggaggggcaacatgccacagagaggt
ggtggcggtggaggaagtggtggaatcggctatccataccctcgtgcccctgtttttcct
ggccgtggtagttactcaaacagagggaactacaacagaggtggaatgcccaacagaggg
aactacaaccagaacttcagaggacgaggaaacaatcgtggctacaaaaatcaatctcag
ggctacaaccagtggcagcagggtcaattctggggtcagaagccatggagtcagcattat
caccaaggatattattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (25)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (45)   
   RefSeq(nuc) (3)   
   GenBank (21)   
   EMBL (21)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (111)   

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