KEGG   Homo sapiens (human): 3664
Entry
3664              CDS       T01001                                 
Symbol
IRF6, LPS, OFC6, PIT, PPS, PPS1, VWS, VWS1
Name
(RefSeq) interferon regulatory factor 6
  KO
K10154  interferon regulatory factor 6
Organism
hsa  Homo sapiens (human)
Disease
H00516  Cleft lip and/or cleft palate
H00611  Popliteal pterygium syndrome (PPS)
H01927  Van der Woude syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    3664 (IRF6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsa04147]
    3664 (IRF6)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    3664 (IRF6)
Exosome [BR:hsa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   3664 (IRF6)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 3664
NCBI-ProteinID: NP_006138
OMIM: 607199
HGNC: 6121
Ensembl: ENSG00000117595
UniProt: O14896 G0Z349
Position
1:complement(209785617..209806142)
AA seq 467 aa
MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ
GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN
CSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQT
MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR
GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK
GQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR
LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPPQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggccctccacccccgcagagtccggctaaagccctggctggtggcccaggtggatagt
ggcctctaccctgggctcatctggctacacagggactctaaacgcttccagattccctgg
aaacatgccacccggcatagccctcaacaagaagaggaaaataccatttttaaggcctgg
gctgtagagacagggaagtaccaggaaggggtggatgaccctgacccagctaaatggaag
gcccagctgcgctgtgctctcaataagagcagagaattcaacctgatgtatgatggcacc
aaggaggtgcccatgaacccagtgaagatatatcaagtgtgtgacatccctcagccccag
ggctcgatcattaacccaggatccacagggtctgctccctgggatgagaaggataatgat
gtggatgaagaagatgaggaagatgagctggatcagtcgcagcaccatgttcccatccag
gacaccttccccttcctgaacatcaatggttctcccatggcgccagccagtgtgggcaat
tgcagtgtgggcaactgcagcccggaggcagtgtggcccaaaactgaacccctggagatg
gaagtaccccaggcacctatacagcccttctatagctctccagaactgtggatcagctct
ctcccaatgactgacctggacatcaagtttcagtaccgtgggaaggagtacgggcagacc
atgaccgtgagcaaccctcagggctgccgactcttctatggggacctgggtcccatgcct
gaccaggaggagctctttggtcccgtcagcctggagcaggtcaaattcccaggtcctgag
catattaccaatgagaagcagaagctgttcactagcaagctgctggacgtcatggacaga
ggactgatcctggaggtcagcggtcatgccatttatgccatcaggctgtgccagtgcaag
gtgtactggtctgggccatgtgccccatcacttgttgctcccaacctgattgagagacaa
aagaaggtcaagctattttgtctggaaacattccttagcgatctcattgcccaccagaaa
ggacagatagagaagcagccaccgtttgagatctacttatgctttggggaagaatggcca
gatgggaaaccattggaaaggaaactcatcttggttcaggtcattccagtagtggctcgg
atgatctacgagatgttttctggtgatttcacacgatcctttgatagtggcagtgtccgc
ctgcagatctcaaccccagacatcaaggataacatcgttgctcagctgaagcagctgtac
cgcatccttcaaacccaggagagctggcagcccatgcagcccacccccagcatgcaactg
ccccctgccctgcctccccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (7)   
   KEGG DISEASE (3)   
   OMIM (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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