KEGG   Homo sapiens (human): 3720
Entry
3720              CDS       T01001                                 
Symbol
JARID2, DIDDF, JMJ
Name
(RefSeq) jumonji and AT-rich interaction domain containing 2
  KO
K11478  protein Jumonji
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01577  Gene silencing by methylation of H3K27 and ubiquitination of H2AK119
N01586  Activation of PRC2.2 by ubiquitination of H2AK119
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Disease
H02618  Developmental delay with variable intellectual disability and dysmorphic facies
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    3720 (JARID2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    3720 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    3720 (JARID2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    3720 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     3720 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 3720
NCBI-ProteinID: NP_004964
OMIM: 601594
HGNC: 6196
Ensembl: ENSG00000008083
UniProt: Q92833
Structure
Position
6:15246069..15522042
AA seq 1246 aa
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNSQKRQHAEGIAGSLKTVN
GLLGNDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEEVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSTREKEPVQK
HKSKEATPAKEKHSDHRADSRREQASANHPAAAPSTGSSAKGLAATHHHPPLHRSAQDLR
KQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTATVTKGAVTYTKAKRELVKDT
KPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAVNGLKVSGRLNPKSCTK
EVGGRQLREGLQLREGLRNSKRRLEEAHQAEKPQSPPKKMKGAAGPAEGPGKKAPAERGL
LNGHVKKEVPERSLERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSG
KAEKGGGKAGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECK
LNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFFR
LINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLE
KEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEPKNGLIHGVAPRNGFRSKLKEVGQA
QLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMSMCFSKE
PAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTG
SILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKL
EDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVC
CGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLST
ISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQ
ICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKV
SGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSASSSSKSASSSS
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaacgggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaattcccagaagaggcagcatgcggaaggcattgctgggagcctgaaaactgtgaat
gggctccttggtaatgaccagtctaagggattaggaccagcatcagaacagtcagagaat
gaaaaggacgatgcatcccaagtgtcctccactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcagtct
cagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccccctcca
gctactcagatatcagacctctctaaaaggaagcctaagacagaagattttcttaccttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtgtattttggaagctctcag
gatgaggaggaagtcgaggaggaagatgatgagacagaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcgacccccaggaaaggaaaaacccacaaacatgttcac
aacgggcatgttttcaatggttccagcaggtcaacacgggagaaggaacctgttcaaaaa
cacaaaagcaaagaggccactcccgcaaaggagaagcacagcgatcaccgggctgacagc
cgccgggagcaggcttcagctaaccaccccgcagcggccccctccacgggttcctcggcc
aaggggcttgctgccacccatcaccacccccctctgcatcggtcggctcaggacttacgg
aaacaggtttctaaggtaaacggagtcactcgaatgtcatctctgggtgcaggtgtaacc
agtgccaaaaagatgcgcgaggtcagaccttcaccatccaaaactgtgaagtacactgcc
acggtgacgaagggggctgtcacatacaccaaagccaagagagaactggtcaaggacacc
aaacccaatcaccacaagcccagttccgctgtcaaccacacaatctcagggaaaactgaa
agtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaagtccact
gggcccgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaag
gaggtgggggggcggcagctgcgggagggcctgcagctgcgggaggggctgcggaactcc
aagaggagactggaagaggcacaccaggcggagaagccgcagtcgccccccaagaagatg
aaaggggcggctggccccgccgaaggccctggcaagaaggccccggccgagagaggtctg
ctgaacggacacgtgaagaaggaagtgccggagcgcagtctggagaggaatcggccgaag
cgggccacggccgggaagagcacgccaggcagacaagcacatggcaaggcggacagcgcc
tcctgtgaaaatcgttctacctcgcaaccggagtccgtgcacaagccgcaggactcgggc
aaggccgagaagggcggcggcaaggccgggtgggcggccatggacgagatccccgtcctc
aggccctccgccaaggagttccacgatccgctcatctacatcgagtcggtccgcgctcag
gtggagaagttcgggatgtgcagggtgatcccccctccggactggcggcccgagtgcaag
ctcaacgatgagatgcggtttgtcacgcagattcagcacatccacaagctgggccggcgc
tggggccccaacgtgcagcggctggcctgcatcaagaagcacctcaaatctcagggcatc
accatggacgagctcccgctcatagggggctgtgagctcgacctggcctgctttttccgg
ctgattaatgagatgggcggcatgcagcaagtgactgacctcaaaaaatggaacaaacta
gcagacatgctgcgcatccccagaactgcccaggaccggctggccaagctgcaggaggcc
tactgccagtacctactctcctacgactccctgtccccagaggagcaccggcggctggag
aaggaggtgctgatggagaaggagatcctggagaagcgcaaggggccgctggaaggccac
acagagaacgaccaccacaagttccaccctctgccccgcttcgagcccaagaatgggctc
atccacggcgtggcccccaggaacggcttccgcagcaagctcaaggaggtgggccaggcc
cagttgaagactggccggcggcgactcttcgctcaggaaaaagaagtggtcaaggaagag
gaggaggacaaaggcgtcctcaatgacttccacaagtgcatctataagggaaggtctgtt
tctctaacaactttttatcgaacagcgaggaatatcatgagcatgtgtttcagcaaggag
cctgccccagccgaaatcgagcaagagtactggaggctagtggaagagaaggactgccac
gtggcagtgcactgcggcaaggtggacaccaacactcacggcagtggattcccagtagga
aaatcagaacccttttcgaggcatggatggaacctcaccgtcctccccaataacacaggg
tccatcctgcgtcacctcggtgctgtgcctggagtgactattccctggctaaatattggc
atggtcttttctacctcatgctggtctcgagaccaaaatcaccttccatacattgactac
ttacacactggtgctgactgcatttggtattgcattcctgctgaggaggagaacaagctg
gaagatgtggtccacaccctgctgcaagccaatggcaccccagggctgcagatgctggaa
agcaacgtcatgatctccccggaggtgctgtgcaaagaggggatcaaggtgcacaggacc
gtgcagcagagtggccagtttgtcgtctgcttcccgggatcctttgtgtccaaagtgtgc
tgtgggtacagcgtgtctgaaaccgtgcactttgctaccacccagtggacaagtatgggc
tttgagaccgccaaggaaatgaagcgtcgccatatagctaagccattctccatggagaag
ttactctaccagattgcacaagcagaagcaaaaaaagaaaacggtcccactctcagtacc
atctcagccctcctggatgagctcagggatacagagctgcggcagcgcaggcagctgttc
gaggctggcctccactcctccgcacgctatggcagccacgatggcagcagcacggtggcg
gacgggaagaaaaagcctcgaaagtggctgcagttggagacgtcagagaggaggtgtcag
atctgccagcacctgtgctacctgtccatggtggtacaagagaacgaaaacgtcgtgttc
tgtctggagtgtgctctgcgccacgtggagaaacagaagtcctgccgagggctgaagttg
atgtaccgctacgatgaggaacagattatcagtctggtcaatcagatctgcggcaaagtg
tctggtaaaaacggcagcattgagaactgtctcagtaaacccacaccaaaaagaggtccc
cgcaagagagcgacagtggacgtgcccccctcccgtctgtcagcctccagttcatccaaa
agtgcttcgagctcatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Network (4)   
   KEGG NETWORK (4)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (41)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (39)   
DNA sequence (59)   
   RefSeq(nuc) (39)   
   GenBank (10)   
   EMBL (10)   
3D Structure (8)   
   PDB (8)   
Protein domain (4)   
   Pfam (4)   
All databases (151)   

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