KEGG   Homo sapiens (human): 3842
Entry
3842              CDS       T01001                                 
Symbol
TNPO1, IPO2, KPNB2, MIP, MIP1, TRN
Name
(RefSeq) transportin 1
  KO
K18752  transportin-1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    3842 (TNPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    3842 (TNPO1)
   03009 Ribosome biogenesis [BR:hsa03009]
    3842 (TNPO1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     3842 (TNPO1)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    3842 (TNPO1)
  Pre-60S particles
    3842 (TNPO1)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm Vac14_Fab1_bd IBN_N Cnd1 PDS5 Adaptin_N MMS19_C CEP104-like_TOG UNC45-central Dopey_N RTP1_C1 DUF3689
Other DBs
NCBI-GeneID: 3842
NCBI-ProteinID: NP_002261
OMIM: 602901
HGNC: 6401
Ensembl: ENSG00000083312
UniProt: Q92973
Structure
Position
5:72816661..72914388
AA seq 898 aa
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgttgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaacttaatcagtatccagactttaacaactacttgattttt
gttcttacaaaattaaaatctgaagatgaacccacaagatcattgagtggtcttatcttg
aagaataatgtgaaagcacactttcagaacttcccaaatggtgtaacagactttattaaa
agtgaatgtttaaataatattggtgactcctctcctctgattagagccactgttggtatt
ttgatcacaactatagcctccaagggagaattgcagaattggcctgacctcttaccaaaa
ctctgtagcctgttggattctgaagattataatacctgtgagggagcatttggtgccctt
cagaagatttgtgaagattctgctgagattttagacagtgatgttttagatcgtcctctc
aacatcatgattcccaaatttttacagttcttcaagcatagtagtccaaaaataaggtct
cacgctgttgcatgtgtcaatcagtttatcatcagtaggactcaagctctaatgttgcac
attgattcttttattgagaatctctttgcattagctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgagcacttgtgatgttgctcgaagttcgaatggatcgcctgcttcct
cacatgcataatatagttgagtacatgctacagaggactcaagatcaagatgaaaatgtg
gctttagaagcctgtgaattttggctaactttagctgaacagccaatatgcaaagatgta
ctcgtaaggcatcttcctaagttgattcctgtgttagtgaatggcatgaagtactcagac
atagatattatcctacttaagggtgatgttgaagaagacgaaacgattcctgatagtgaa
caggatatacggccacgttttcaccgatcgaggacggtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgatgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctggatgttcttgcaaatgtgtatcgtgat
gaactgctgccacatattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatcaggcattttggttttaggagcaattgctgaaggttgcatgcagggcatg
attccatacttgcctgagcttattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacatgctggactcttagccgctatgcacactgggtggtcagccag
ccgccagacacgtacctgaagccattaatgacagaattgctaaagcgcatcctggacagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccctagaagaggaggcttgt
acagaacttgttccttaccttgcttatatacttgataccctggtctttgcatttagtaaa
taccagcataagaacctgctcattctttacgatgccataggaacattagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagcactgcagtctggattccttccgtactgtgaacctgtgtatcagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctaaacaatgctcaaccagatcaa
tatgaagctccagataaagattttatgatagtggctcttgatttactgagtggcctggct
gaaggacttggaggcaacattgaacagctggtagcccgaagtaacatcctgacactaatg
tatcagtgcatgcaggataaaatgccagaagttcgacagagttcttttgccctgttaggt
gacctcacaaaagcttgctttcagcatgttaagccttgtatagctgatttcatgccaata
ttgggaaccaacctaaatccagaattcatttcagtctgcaacaatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagagacaatgaggaaaaggattca
gcattccgtggaatttgtaccatgatcagtgtgaatcccagtggcgtaatccaagatttt
atatttttttgtgatgccgttgcatcatggattaacccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggcgatgaaaattggaggcgtttc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (31)   
   RefSeq(nuc) (13)   
   GenBank (9)   
   EMBL (9)   
3D Structure (21)   
   PDB (21)   
Protein domain (15)   
   Pfam (15)   
All databases (100)   

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