KEGG   Homo sapiens (human): 388015
Entry
388015            CDS       T01001                                 
Symbol
RTL1, HUR1, MART1, Mar1, PEG11, SIRH2
Name
(RefSeq) retrotransposon Gag like 1
Organism
hsa  Homo sapiens (human)
SSDB
Motif
Pfam: RT_RNaseH_2 DUF4939 Retrotrans_gag RT_RNaseH RVT_1 Ty3_capsid Asp_protease_2 gag-asp_proteas
Other DBs
NCBI-GeneID: 388015
NCBI-ProteinID: NP_001128360
OMIM: 611896
HGNC: 14665
Ensembl: ENSG00000254656
UniProt: A6NKG5 B9EK54
Position
14:complement(100879753..100903722)
AA seq 1358 aa
MIEPSEDSFETMMEHKNPSSKQMESSEGSSNTTEATSGSGVRGEAGPASGPAQEKKEPPS
GPLQEMEELPTDLLQDMEEPSSGPRKEIEDPPNDLLQDLEESCNGSHQARGDPLSGASDR
MKEASVNPSGAREEQEAHTDLKESGREETPQEQNQTEHSTAELMAMVRSIISLYFRMQDL
KEQQRVAEEILIKGINAGQLPAPKHFSGDRREFHEFIVLCQLTLQSYPRMFYNDRLRVGY
VINHLSGLALEWAKALLQENSPLIGDFPAFLEAMSEVFEYRQALRVAEEAMFTIRQGGRS
ATEYIDEFQSLVPILGWPDEVLQAHLCQGLNEEIRHYLFRVPQPDSLDSLIVLILQIEEK
LAERRAMLRLPPEARPRNLTWIDSPAPERWMVSSWLPSEVHPDINRAHLFLLLMVRVNPY
HSVAVQALVDSGADGNFMDEKFAQEHYVELYEKPYPQPVQSVDGSLIGNEPVWLYTEPLV
CIHQNHQESIEFDIVPSPNFSVVLGIRWLRVHAPEVDWIKGRCTFHSPYCLKNCFRPPPP
CIALERHGMSLLPGLPHPYSDLADVFNPKEADDETSDQPSSDGSDDLSESEPSELQQAGD
SDHSETFYECPSTAPWEPVGARMQERARLQEEYWDLQDMLTNRQDYIQMIPELFDQLHGA
EWFTKLELRGTIVEESVNGHRTEDVWKAAFGLELEEMKSYQPFALSPDPIIPQNVIHFIL
KDMLGFFVLSYGQEVLIYSMSQEEHLHHVRQVLVRFRHHNVYCSLDKSQFHRQTVEFLGF
VVTPKGVKLNKNVMTIITGYPTPGSKLSLRNFIEFVFPYRHFVERFSIIAEPLVRQLLSS
YQFYWGVEEQEAFECLKRAFRKAPLLHHPKPQNPFYLETGVTGTALHASLIQIDDQTGKR
ACCAFYSRNISPIEVEYSQAEMKILPIRAAFMVWCRYLENTEEPIMILLNTEDLASLNND
RLTVLLPGHWVFFFSHFNFDVMELPEQDGGRALPPVRNLRWRRAFQRNTAARQTLLLASR
GFPRDPSTESGEEENEEQDELNEQILRQELLAMIPIDQILNSFLAHFSMAQIRAVILHFF
RGLLYWKNTLALAAILVLLRVRQCLSLRPAPAMRVARPQPQRSLRLILDSSLIAGSSITT
AITQLLTQMPALVGANTIPAQELAELFLGPGRWQRNALHSQAHRGLQFTPGFWLTLCEFF
GVRVTPQEGHLPALRQNRYLELHVVGDEDVVLREALQDDLQRYRQCGLHDGLQDTSQDKQ
DNDVQEAPPSHTAATHPPRPRHLMDPQVLEFLGSRLLHIHSADGQLHLLSREQAARALSQ
FLTLIYRRALPIPAWESQPREQARLEELPDEDEDANLD
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgatagaaccctctgaagactcatttgagacgatgatggagcataagaatccatcatca
aaacaaatggagtcctccgagggctcatccaacaccaccgaggcgacgtcgggcagtgga
gtgcggggagaggcagggccagccagcggcccagcccaggaaaagaaggagccccccagt
ggcccactccaggaaatggaagagctgcccactgatctactccaagacatggaggagcca
tccagtggcccacgtaaggaaatagaggatccacccaatgacctactccaagacctggag
gagtcatgcaacggttcacaccaggcaaggggggatccactcagtggagcatctgatagg
atgaaagaagcatcagtcaacccatcgggagcccgagaagaacaagaggctcacactgac
ctgaaggaatcgggaagggaggagactcctcaagagcaaaaccagaccgagcactcaacc
gcagaacttatggccatggtgaggtccatcatctcgctgtacttccgaatgcaagacctc
aaagagcaacagagagtagcagaagagatcttgatcaaagggatcaatgcaggccaactg
cccgccccaaagcacttctctggcgatcgcagagaattccacgagttcatcgtactctgc
caactgaccttacagagctacccaagaatgttctataacgaccgtctgagagttggctat
gtcatcaatcacctgtccggcttggcattagaatgggccaaagctctactgcaggaaaac
agccccctgatcggagacttcccagccttcctggaggccatgtccgaagtgtttgagtac
cgccaggcactgcgtgtggcagaagaggccatgttcaccatcaggcagggcggccgctct
gccactgagtacatcgatgagttccagagcctggtacccatcttgggctggccagatgaa
gtcctgcaggcccacttgtgccaggggctcaacgaggagatcaggcactatctattccgg
gtccctcagccggattccctagacagtctgattgtgctcatcctgcaaatagaagagaag
ctggcagagagaagagctatgctcaggctgccccccgaggcccgcccccggaacctgacc
tggatcgactcacctgctccagagaggtggatggtcagcagctggttgcccagcgaagtc
catccggacatcaatcgcgcccacctcttcctgctgctcatggtgagagtgaacccctac
cacagcgtcgcggtccaggccctggtggattcgggagctgacggcaacttcatggatgag
aagttcgcccaagagcactacgtcgagctctacgagaagccgtacccacagccggtccaa
tccgtggacggctcgctgattggcaacgagcctgtctggctctacacggagcccctggtg
tgtatccaccagaaccaccaggagtccatcgaatttgacatcgtaccttcaccgaacttc
tctgtggtcctaggcatccgctggctccgagtccacgcccccgaagtcgactggatcaaa
ggccgctgcaccttccactctccctactgcctgaagaactgcttccgcccgcccccgcca
tgcattgccctagagaggcacggcatgagcctgctacccggactgccacacccatactca
gacctggccgacgtgtttaacccgaaggaagcagatgatgagacttccgaccagccaagc
tcagacggatccgatgatctttctgaatcagagccctctgagcttcagcaggctggagac
agtgatcacagcgagaccttttacgagtgtccctccaccgcgccttgggaacctgtgggt
gccaggatgcaagaaagagccaggctacaggaggaatactgggacctgcaggacatgctg
accaacagacaggactacatacagatgattccggaactgtttgaccagttacacggagcc
gagtggttcacaaaactggagctgcgtgggaccattgtggaggaaagcgtgaacgggcac
cgcaccgaagatgtgtggaaagcagcgtttggtttggagcttgaagagatgaagagctac
cagccgtttgcgctctccccagaccctatcatacctcagaacgtgattcacttcatccta
aaggacatgctagggttctttgtgctttcttatggccaggaagtcctgatctactcaatg
agtcaggaggagcacctccaccacgtccgccaagtcctggtccgcttccgccatcacaac
gtctactgctccctggacaagagccagttccaccgccaaaccgtggaattcctgggcttc
gtcgtcacccccaaaggggtgaaactgaacaagaacgtcatgaccatcataacagggtac
cctacccctggctccaagctatctctgcgaaacttcatcgaattcgtcttcccctaccgc
cacttcgtggagcgcttcagcatcatcgcagagcccctggtgcggcagctgctgagctcc
taccagttctactggggagtcgaggagcaagaggccttcgagtgcctgaagagggctttc
cgcaaggcgcctctcctccaccaccccaagccccagaacccattctacttggaaaccggc
gtcaccggcacggccctgcacgcctccctgatccaaatcgacgaccaaaccggcaagaga
gcctgctgcgctttctactcccgcaacatctcccctatcgaggttgagtactctcaagcg
gagatgaagattcttccaatacgggctgccttcatggtgtggtgccgctacctggagaac
accgaggagcccatcatgatccttctcaacacagaggatctagcctctctgaataatgac
aggctcaccgtacttctccccgggcattgggtcttcttcttctcccacttcaactttgac
gtcatggagctgccagaacaagacggcggccgagctctgccacctgtgagaaacctccgg
tggaggagagccttccagaggaacactgccgccaggcaaaccctgctgctggcctcaagg
ggattccccagggatccatcgacggaatccggggaagaagagaatgaagaacaggatgag
ctcaatgaacagatcctacggcaagagctgctggccatgatacccatcgaccagatcctc
aacagcttcctcgcccacttcagcatggcccagatcagggccgtcattctgcacttcttc
cgaggcctcctgtactggaagaacaccctagccctggcagccatcctcgtgctactgcgc
gtgaggcaatgcctctcgctgcggccggcacccgccatgcgggtggctcggccccagccc
cagcgctccctacgactcatcctggattcgtccctcatcgcaggcagcagcatcacgaca
gccatcacccagctgctcacccagatgcccgctctcgtaggtgcaaacaccatcccagcc
caggagctggctgagctgttcctgggccctggccgctggcagcgaaatgctctgcactcc
caggcccaccgaggcctgcagttcacccctggcttctggctgacgctgtgtgagttcttc
ggtgtcagagtcaccccccaggagggccacctccctgccctgcgtcagaaccgctacctg
gagctgcacgtcgttggtgatgaggatgtcgtcttgcgagaagccctgcaagacgacctg
caacgttaccgtcagtgtggcctgcatgacggcctgcaagacacctcgcaggacaagcag
gacaacgacgtgcaggaggccccacccagccacacagcagccacccacccaccccgccca
cgccacctgatggatccccaggtcctggaattccttggtagccgcctgctccacatccac
agtgcagatggccagctgcacctgctcagccgggagcaggcagccagggccctgagccag
ttcctgaccctgatctacaggcgggccctgcccatccccgcctgggagagccagcccagg
gagcaggcaaggctagaagagctgcctgatgaggacgaagatgctaacctcgactga

  All links  
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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