KEGG   Homo sapiens (human): 4301
Entry
4301              CDS       T01001                                 
Symbol
AFDN, AF6, MLL-AF6, MLLT4, l-afadin
Name
(RefSeq) afadin, adherens junction formation factor
  KO
K05702  afadin
Organism
hsa  Homo sapiens (human)
Pathway
hsa04014  Ras signaling pathway
hsa04015  Rap1 signaling pathway
hsa04024  cAMP signaling pathway
hsa04520  Adherens junction
hsa04530  Tight junction
hsa04670  Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    4301 (AFDN)
   04015 Rap1 signaling pathway
    4301 (AFDN)
   04024 cAMP signaling pathway
    4301 (AFDN)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    4301 (AFDN)
   04530 Tight junction
    4301 (AFDN)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    4301 (AFDN)
SSDB
Motif
Pfam: RA DIL PDZ FHA PDZ_6 PDZ_2 ASPP1-2_RA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 4301
NCBI-ProteinID: NP_001278893
OMIM: 159559
HGNC: 7137
Ensembl: ENSG00000130396
UniProt: P55196 G1UI22 A8MQ02
Structure
Position
6:167826564..167972023
AA seq 1781 aa
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILVF
QLKRRPPDHIPKKTKKHLEGKTPKGKERADGSGYGSTLPPEKLPYLVELSPGRRNHFAYY
NYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKLDDNSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLMVKG
PRHKPGIVQETTFDLGGDIHSGTALPTSKSTTRLDSDRVSSASSTAERGMVKPMIRVEQQ
PDYRRQESRTQDASGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMA
CRYVLSNQYRPDISPTERTHKVIAVVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNF
IKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDD
VLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQ
QLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQAL
LQNYHCAPDEPFIPTDLIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYS
CDVVRNIPNGLQEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLLRENTELAQPL
RKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSV
DGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGK
PRPKSEGFELYNNSTQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPP
SPGGKSAYASGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDR
MAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRKSD
SDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPVAVSQPIR
TDLPPPPPPPPVHYAGDFDGMSMDLPLPPPPSANQIGLPSAQVAAAERRKREEHQRWYEK
EKARLEEERERKRREQERKLGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQETVIREL
QPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQ
ELQSKPDRSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAER
RARDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRLEAE
RRRQHDEAARRLLEPEAPGLCRPPLPRDYEPPSPSPAPGAPPPPPQRNASYLKTQVLSPD
SLFTAKFVAYNEEEEEEDCSLAGPNSYPGSTGAAVGAHDACRDAKEKRSKSQDADSPGSS
GAPENLTFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtattcgggtc
tctagtactgccaccactcaagatgtaatcgaaacgctcgcggagaaatttcgacctgat
atgcgaatgctgtcctctcccaagtattcactctatgaagtgcatgtcagcggagaagaa
agaagattggatatagatgagaaacctctagttgtacaactgaattggaacaaagatgat
cgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaaggctcaa
agtaatggacctgaaaagcaggaaaaagaaggggttatccagaacttcaagagaactctc
tcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacaggcatct
gataaagatgatagacctttccaaggggaggatgttgaaaattctcgactggctgctgag
gtttacaaagacatgccggaaaccagctttactcgaaccatttctaatcctgaggtggtt
atgaaacgacggaggcagcaaaaattggaaaagagaatgcaggaatttcggagctcagat
gggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaaccaaatatt
ccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggctgaagct
ttagagaagtatggtctggaaaaagaaaaccctaaggattactgcatcgcccgggttatg
cttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattcttgatgat
gatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggattttagtcttt
cagttgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacacttggaaggc
aagacacccaagggaaaggagagagctgacgggtctggctatggctccacccttcctccg
gagaagctgccctatttagtagagttaagcccagggagaaggaatcactttgcctactac
aactatcacacttacgaagatggttctgactctagagataagccaaagctttaccgcctt
cagttaagtgttactgaagttgggacagaaaagttggatgacaactctatccagttgttt
ggcccaggaattcagccccatcactgtgaccttaccaacatggatggagtggtcactgtg
acgcccagaagtatggacgcagaaacctacgtggaaggccagcgcatctcagaaaccacc
atgctgcagagtggcatgaaagtgcagtttggggcgtcccatgtatttaagtttgtggac
cccagtcaggatcatgctcttgcaaaaagatctgtggatggaggcctgatggttaagggc
ccaagacataaacctggaattgttcaggagacaacttttgatttgggaggagatattcat
agtgggacagcattaccgacaagcaagagcaccactaggctggacagcgacagagtgtcg
tctgcctctagcacagccgagcggggaatggtgaagccgatgatcagagtagaacagcag
ccagattatcgcaggcaagaaagcagaacacaggatgcttctgggcctgagctgatacta
cctgcaagcattgaattcagggaaagttctgaagattcatttttgtctgccattataaat
tatactaatagctctacagtccactttaagttgtcccctacatatgtattatatatggca
tgccggtatgtattgtccaaccagtacagacctgacatcagccctacagagcgcacacat
aaagtcattgcagtcgtcaacaagatggtgagcatgatggagggtgtcatccagaaacag
aagaatattgcaggggcacttgccttctggatggcaaatgcatctgaacttctcaacttc
attaagcaagaccgagaccttagtcggatcacactggatgctcaagatgttttagcacat
ttggttcaaatggcatttaaatacttggttcactgtcttcaatcagaacttaataattac
atgccagcctttctagatgaccctgaagagaacagtctgcaacgaccaaaaatagatgat
gtgctgcacacgctcacaggagccatgtccttgctacgacgctgcagagtcaatgccgcc
ctgaccatccagctcttctctcagctcttccacttcatcaatatgtggctgttcaataga
ttggtgaccgacccagattcggggctgtgctcccattactggggtgcgattatccgtcag
cagttgggccatattgaagcctgggctgagaagcaggggctggaactggctgcggactgt
catctgagcaggatcgtgcaggcaacgactttgcttaccatggataagtatgcacctgat
gacattccaaatataaacagcacctgctttaagttaaattcattacaacttcaagcctta
ttacagaactatcactgtgcacctgatgagccttttatcccaacggatcttatagaaaat
gtagtgactgtggctgaaaacactgccgatgagctggcccgcagtgatggaagggaagtg
cagttggaggaggatcctgatctgcagctgccgtttcttttgccagaagatggttattct
tgtgatgttgtcagaaacattccaaatggtttacaagaatttttagaccctctgtgccag
agaggattttgcaggttaattcctcacacacgttcaccaggtacttggacaatatatttt
gaaggtgcagattatgaaagtcaccttctgcgtgagaacacagagctggctcagcctctg
aggaaagaacctgaaataatcactgtgaccctaaaaaagcagaatggaatgggccttagc
attgttgcagcaaagggtgctggtcaagataaactaggaatctatgtgaagtcggttgtg
aaaggaggtgctgcagatgtggatggacgtctagctgcaggtgatcagctcctcagtgtg
gatggacgaagtctggttggactctctcaggaaagggcggcagaactcatgacaagaaca
agctctgtggtgacactggaagtagcaaagcagggtgccatctaccacggtctggccacc
cttctcaatcagccatcccccatgatgcagagaatttcagatcgtcgtggctcaggtaaa
ccccgaccaaagagtgaaggctttgagctctataataattcaactcaaaatgggtctcct
gagagtcctcagctgccttgggcagaatatagtgaaccaaagaaattgcctggtgatgac
agactgatgaaaaatagagctgatcaccgttccagccccaacgtagcaaatcagcctcct
agtcctggagggaaaagtgcatatgcctctggaacaacagcgaagataacatctgtctct
actggaaacctctgcactgaggagcagacgcctccgcctagacctgaagcctaccccatc
cccactcagacgtacaccagagagtattttaccttcccagcttccaaatcccaggatcgg
atggctcctcctcagaaccagtggccaaattatgaggaaaagccacatatgcacacagat
agtaatcattccagtattgcaattcagcgtgttacacgttcccaagaagaacttcgagaa
gataaagcttaccaacttgagcggcatcgaatagaggcagctatggaccgaaagtctgat
agtgatatgtggataaatcagagctcctcactggactccagtacctctagccaggagcat
ctgaaccattcctctaagtcggtcacccctgcttccacactgaccaaaagtggccctggc
cgttggaaaacaccagcagccataccggccacccctgtggccgtctcccagccaatccga
acagacctgcctccgccacccccgccacctccagtccactatgccggtgatttcgatgga
atgtccatggatttgcctctcccaccacccccttccgccaaccagatagggctgccgtct
gcgcaggtggctgctgctgaacggagaaagagagaagaacatcagcgttggtatgagaag
gagaaggcccgcctggaggaggagcgggagaggaagcggagagagcaggagaggaagttg
ggccagatgcgcactcagtccttaaaccctgctccgttttctcccctgactgcacagcag
atgaagcccgaaaagccttccacactccagcggccacaggaaacagtcattcgggagctg
cagcctcagcagcagccccgcacgatcgagcgcagagacttgcagtacattacagtcagc
aaagaggagctttcctcgggggacagtctgtcccccgacccgtggaagcgggacgccaag
gagaagctggagaagcagcagcagatgcacatcgtggacatgctgagcaaggagatccag
gagctccagagcaaaccggaccgcagcgccgaggagagcgaccggctgcgcaagctcatg
ctggagtggcagttccagaagagactccaggagtcgaagcagaaggacgaagatgacgag
gaggaggaggacgatgatgtggacaccatgctgatcatgcagcgcctggaggctgaacga
agagcgagggacgaggagcggaggcggcagcagcagttagaagagatgcgcaagcgggaa
gcggaagaccgagcgaggcaagaggaagagcgccggcggcaggaggaggagcgaacaaaa
cgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagccgag
aggcgcagacagcacgacgaggcggcgcgcaggttgctggagcccgaggcgcccggtctg
tgccgccctccgcttccccgggactacgagcccccgtccccgtcccccgcgcccggcgcc
cctcctcccccgcctcagcgaaacgcctcctacctcaaaacacaggtcctctcccccgac
tcgctgttcactgccaagtttgttgcatacaatgaggaggaggaggaggaggactgcagc
ctagcaggaccaaactcttacccaggatctactggagcagctgttggagcccatgacgcc
tgtcgggatgcaaaagagaagcgctctaaaagccaagatgcagattcacctggaagttct
ggggcccctgaaaacttgacattcaaggaacgccagcgtcttttttcacaaggtcaagat
gtatccaataaagtgaaagcttctcgtaaattaacagaactggagaatgaactgaacaca
aagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (6)   
   KEGG PATHWAY (6)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (102)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (98)   
DNA sequence (142)   
   RefSeq(nuc) (100)   
   GenBank (21)   
   EMBL (21)   
3D Structure (6)   
   PDB (6)   
Protein domain (8)   
   Pfam (8)   
All databases (292)   

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