KEGG   Homo sapiens (human): 441250
Entry
441250            CDS       T01001                                 
Symbol
TYW1B, LINC00069, NCRNA00069, RSAFD2
Name
(RefSeq) tRNA-yW synthesizing protein 1 homolog B
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsa03016]
    441250 (TYW1B)
Enzymes [BR:hsa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     441250 (TYW1B)
Transfer RNA biogenesis [BR:hsa03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    441250 (TYW1B)
SSDB
Motif
Pfam: Wyosine_form Flavodoxin_1 Radical_SAM
Other DBs
NCBI-GeneID: 441250
NCBI-ProteinID: NP_001138912
HGNC: 33908
Ensembl: ENSG00000277149
UniProt: Q6NUM6
Position
7:complement(72574513..72828200)
AA seq 668 aa
MDPSADTWDLSSPLISLWINRFYIYLGFAVSISLWICVQIVIEMQGFATVLAEAVTSLDL
PVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGK
TYLKGMRDAVFGLGNSAYASHFNKVGKNVDKWLWMLGVHRVMSRGEGDCDVVKSKHGSIE
ANFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHGSEEREEGSQEQDELHHRDT
KEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGR
NEDGERRAMITPALREALTKQVDAPRERSLLQTHILWNESHRCMETTPSLACANKCVFCW
WHHNNPVGTEWLWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSL
VGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDSLKKI
DRPLFKDFWQQFLDSLKALAVKQQRTVYRLMLVKAWNVDELQAYAQLVSLGNPDFIEVKG
VTYCRESSASSLTMAHVPWHEEVVQFVRELVDLIPEYEIACEHEHSNCLLIAHRKFKIGG
EWWTWIDYNRFQELIQEYEDSGGSKTFSAKDYMARTPHWALFGANERSFDPKDTRHQRKN
KSKAISGC
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggatccttctgcggatacatgggacctctcctcacctttaatatcattatggataaac
aggttttacatttatctgggctttgctgttagcattagcctttggatttgtgtccagatt
gtcatcgagatgcagggatttgcaacagttcttgctgaagcagttacgtccctggatctg
cctgtggccattattaatctaaaagaatatgatccagatgatcatctgatagaagaggtg
actagtaaaaatgtctgtgtcttcctggttgcgacatacactgacggcctaccaaccgaa
agtgcagagtggttctgcaaatggttagaggaagcatccattgattttcgatttggcaaa
acttacctgaagggtatgagagatgcggtatttggcctgggaaattctgcctatgctagc
cacttcaacaaggttggcaaaaatgttgacaagtggctctggatgcttggcgtgcatcgt
gtgatgagtcgaggggagggcgactgcgacgtggttaaaagcaagcacggcagcattgag
gccaacttcagagcatggaagaccaagttcatctcccagctgcaggcacttcagaaaggg
gagagaaagaagtcctgtggcggccactgcaagaaaggcaaatgtgaatctcaccaacat
ggctcagaggagagggaggaaggatctcaagagcaggacgaattgcatcacagagacacc
aaggaggaagaacccttcgagagctccagtgaagaagagtttggtggtgaggaccatcag
agcctaaattccattgttgatgttgaagatttgggcaaaattatggatcacgtgaagaaa
gaaaagagagaaaaggaacagcaggaagagaagtctggtttgttcaggaacatggggagg
aatgaagatggtgaaagaagagctatgataactcctgctctccgagaagcccttactaaa
caagtcgatgctccgagggagaggagcttgttacaaacacacattctatggaatgagagc
catcgctgcatggaaaccaccccgagcttggcgtgtgctaataaatgtgtcttctgttgg
tggcaccacaacaaccctgtgggcactgaatggttgtggaagatggaccagcctgaaatg
atcttgaaggaagccattgaaaaccatcagaacatgattaagcagtttaaaggagtaccg
ggcgtcaaagcagaacgctttgaagaaggaatgacggtaaagcactgtgcattgtccctc
gtgggagaaccaataatgtacccagagatcaacaggtttttgaagctactccaccagtgt
aaaatctccagcttcctggtcacaaatgcacaatttcctgcggaaatcaggaacctcgag
ccagttactcagctgtatgtcagtgtggatgccagtaccaaagacagcctgaagaaaatc
gaccgcccactcttcaaggatttctggcagcaattccttgacagtttaaaagccttggca
gtcaagcaacaacgaactgtctacagactgatgctcgtgaaagcatggaacgtggacgag
ctccaggcctacgcgcagctcgtgtccctggggaatcctgacttcatcgaagtgaagggc
gttacctactgcagagaaagttcagcaagcagtcttaccatggcccatgtgccctggcat
gaggaagtggtacagtttgtccgcgagctggtggatctgatccccgaatatgaaattgca
tgtgaacacgaacactctaattgcctcctgatagcacacagaaagtttaaaattggtggt
gaatggtggacatggatcgattataaccgcttccaggagctcatccaggaatatgaagat
agtggtggatcaaaaacgttcagcgcaaaggattatatggccagaactcctcactgggca
ttatttggtgccaatgaaagaagctttgatcccaaggacacaagacatcagagaaagaac
aaatcaaaggctatttctggatgttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (28)   
   RefSeq(nuc) (8)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (61)   

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