KEGG   Homo sapiens (human): 5100
Entry
5100              CDS       T01001                                 
Symbol
PCDH8, ARCADLIN, PAPC
Name
(RefSeq) protocadherin 8
  KO
K16499  protocadherin delta 2
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    5100 (PCDH8)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   5100 (PCDH8)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 5100
NCBI-ProteinID: NP_002581
OMIM: 603580
HGNC: 8660
Ensembl: ENSG00000136099
UniProt: O95206
Structure
Position
13:complement(52842889..52848640)
AA seq 1070 aa
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAE
VGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVL
DQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPRE
AFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAA
PASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE
VRKGGALREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGH
SDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEK
VLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgagtcctgtgaggcgttggggcagcccctgccttttccccttgcagctcttcagcctc
tgctgggtgctctcagtggcccagagcaaaacagtccgatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggccgaggacctgcatatgaaagtatcgggtgac
acaagcttccgcctgatgaagcaattcaacagctctctgctccgggtgcgcgaaggcgac
gggcagctgaccgtcggggacgccggcctggaccgcgagcggctgtgtggccaggccccg
cagtgcgtgctggccttcgatgtggtcagcttctcgcaggagcagttccggctggtgcac
gtggaggtagaggtgagggacgtcaacgaccacgcgccgcgcttccccagggcccagatc
ccggtagaggtgtccgagggtgcggcagtgggcacgcgcatccccttggaggtgccggtg
gacgaggacgtgggcgccaacgggctgcagaccgtgcgcctggccgagccgcacagcccc
tttcgcgtggagctgcagacgcgagcggacggcgctcagtgcgcagacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctggtggcccaggacggc
ggccgcccgccgcgctccgccacggctgccctcagcgtgcgcgtcctggatgcgaatgac
cacagcccggccttcccgcagggcgccgtggccgaagtggagctggcggaagacgcgccc
gtgggctccctgcttctcgacctggacgcagccgaccccgacgagggacctaacggcgac
gtggtgttcgcatttggcgcccgcaccccgccggaggcgcgccgcctctttcggcttgac
ccgcgatcaggccgcctcaccctggccgggcccgtggactacgagcgtcaggacacctac
gagctggacgtgcgggcgcaggaccgcggacccgggccccgcgctgccacctgcaaggtc
atcgtgcgcatccgagacgtcaatgacaacgcacccgacatcgccatcaccccgctggcc
gccccaggcgcgccggcaacctcacccttcgccgctgccgccgccgccgctgcactcggg
ggagcggacgctagctcgccggcgggagccgggacgccggaggctggtgccacttcgctg
gtgccggagggggcggcgcgcgagagcctggtggccctggtcagcacctcggacagggac
tcgggcgccaacgggcaagtgcgctgcgccctctatgggcacgagcacttccggctgcag
ccggcctacgcgggcagctacctggtggtgaccgcggcgtcgctggaccgcgaacgcatc
gccgagtacaacttgacgctggtggccgaggatcgcggcgcgcccccgctgcgcacagtg
cggccctacacggtgcgtgtgggcgacgagaacgacaacgcgccgctcttcacgcggccg
gtctatgaggtgtcggtgcgcgagaacaacccgccaggcgcctacctggccacggtggcc
gcccgcgaccgggacctgggccgcaacggccaggtcacctaccggctgctggaggccgag
gtgggccgcgccgggggcgccgtgtccacttatgtctcggtggacccagctaccggagcc
atctacgcgctgcgcagcttcgactatgagacgctgcgccaactcgacgttcgcatccaa
gctagcgacggcggctcccctcagctttccagcagcgccctagtgcaagtgcgcgtgctg
gaccagaacgaccatgcgccagtcctggtgcacccggcgccagccaatggctccctagaa
gtggcggtgcctgggcgcaccgcaaaggacacggttgtggcccgtgtgcaggcccgggat
gcagacgagggagccaacggggagctggcgttcgagctgcagcagcaggagccgcgcgaa
gccttcgccatcggccgccgcacgggggagatactgctcaccggcgacctctcgcaggag
ccacccggtcgcgtgttcagggcgctcctggtcatatccgacggcggccgtcccccgctc
accaccaccgcaactgtcagcttcgtggtaacagcagggggcgggcgtgggccggctgcg
cctgccagtgcaggaagcccggagcgttcccgcccgcctggctctcggctcggggtgtcc
gggtcggtgctgcaatgggacacgccgctgatcgtcatcatcgtgctggccgggagctgc
acgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggag
gtgcgcaaagggggggccctccgggaagagcggcccggggcggcgggcggcggagcctcg
gctcccggctccccggaggaggccgcccggggagccgggcccaggcccaacatgttcgac
gtgctcaccttccctggcaccggcaaagcgccctttggcagccccgcggcggacgcgcct
ccgcctgcggtcgccgcggccgaagtgccgggctcagagggcggcagcgccactggggaa
agcgcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggt
gcctccccgggttttggaaaggagccggcgccccctgtggcggtgtggaaaggacactcc
ttcaacaccatttctggcagagaagcagagaagttcagcggcaaagacagcggtaaaggg
gacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaaaaaggatctc
atcaaccacatgcagagtggactgtgggcgtgcaccgctgagtgtaagatcctgggccac
tctgaccgctgctggagcccatcctgcagcgggcccaacgcacatccatcgcctcaccca
ccagcccagatgtcaaccttctgtaagagcacgtcactgcctcgggatcctctgcgcagg
gacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgagaaa
gtactgcacagagactatgacaggacagtcactctgctctcccctccccgtccagggagg
ctcccagacctgcaggagattggagtacccctctaccagtcccctcctggcaggtacctg
tccccgaagaagggagccaatgaaaatgtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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