KEGG   Homo sapiens (human): 51013
Entry
51013             CDS       T01001                                 
Symbol
EXOSC1, CGI-108, CSL4, Csl4p, PCH1F, SKI4, Ski4p, p13
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    51013 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    51013 (EXOSC1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     51013 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     51013 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 Nairovirus_NSm
Other DBs
NCBI-GeneID: 51013
NCBI-ProteinID: NP_057130
OMIM: 606493
HGNC: 17286
Ensembl: ENSG00000171311
UniProt: Q9Y3B2
Structure
Position
10:complement(97435909..97446006)
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgccacctgtgagatactgcatccccggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacctacacccgccacggctacatcttttcgtcgcttgccggctgt
ctgatgaagagcagcgagaatggcgcgcttccagtggtgtctgtagtgagagaaacagag
tcccagttactgccagatgtgggagctattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctgtatgtggggtccatgcctcttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagcaactgaaaaagacaaggttgaaatttataag
agtttccgcccaggtgacattgtcttggccaaagtgatctccttaggtgatgcacagtcc
aactacctgctaaccaccgccgagaacgagctgggagtggtggtagcccacagtgagtca
ggtatccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtagcccgagtacaacccgaattcttgcagacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (38)   
   RefSeq(nuc) (10)   
   GenBank (14)   
   EMBL (14)   
3D Structure (4)   
   PDB (4)   
Protein domain (4)   
   Pfam (4)   
All databases (77)   

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