KEGG   Homo sapiens (human): 51119
Entry
51119             CDS       T01001                                 
Symbol
SBDS, CGI-97, SDO1, SDS, SWDS
Name
(RefSeq) SBDS ribosome maturation factor
  KO
K14574  ribosome maturation protein SDO1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03008  Ribosome biogenesis in eukaryotes
Disease
H00439  Shwachman-Diamond syndrome
H01132  Aplastic anemia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    51119 (SBDS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsa03009]
    51119 (SBDS)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    51119 (SBDS)
SSDB
Motif
Pfam: SBDS SBDS_domain_II SBDS_C 2-Hacid_dh_C
Other DBs
NCBI-GeneID: 51119
NCBI-ProteinID: NP_057122
OMIM: 607444
HGNC: 19440
Ensembl: ENSG00000126524
UniProt: Q9Y3A5 A0A0S2Z5I7
Structure
Position
7:complement(66987680..66995586)
AA seq 250 aa
MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNV
SKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCV
NPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPV
NEGKKLKEKLKPLIKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK
DVEEGDEKFE
NT seq 753 nt   +upstreamnt  +downstreamnt
atgtcgatcttcacccccaccaaccagatccgcctaaccaatgtggccgtggtacggatg
aagcgtgccgggaagcgcttcgaaatcgcctgctacaaaaacaaggtcgtcggctggcgg
agcggcgtggaaaaagacctcgatgaagttctgcagacccactcagtgtttgtaaatgtt
tctaaaggtcaggttgccaaaaaggaagatctcatcagtgcgtttggaacagatgaccaa
actgaaatctgtaagcagattttgactaaaggagaagttcaagtatcagataaagaaaga
cacacacaactggagcagatgtttagggacattgcaactattgtggcagacaaatgtgtg
aatcctgaaacaaagagaccatacaccgtgatccttattgagagagccatgaaggacatc
cactattcggtgaaaaccaacaagagtacaaaacagcaggctttggaagtgataaagcag
ttaaaagagaaaatgaagatagaacgtgctcacatgaggcttcggttcatccttccagtc
aatgaaggcaagaagctgaaagaaaagctcaagccactgatcaaggtcatagaaagtgaa
gattatggccaacagttagaaatcgtatgtctgattgacccgggctgcttccgagaaatt
gatgagctaataaaaaaggaaactaaaggcaaaggttctttggaagtactcaatctgaaa
gatgtagaagaaggagatgagaaatttgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (5)   
   KEGG DISEASE (2)   
   OMIM (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (6)   
   PDB (6)   
Protein domain (4)   
   Pfam (4)   
All databases (56)   

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