KEGG   Homo sapiens (human): 51399
Entry
51399             CDS       T01001                                 
Symbol
TRAPPC4, CGI-104, HSPC172, NEDESBA, PTD009, SBDN, SYNBINDIN, TRS23
Name
(RefSeq) trafficking protein particle complex subunit 4
  KO
K20303  trafficking protein particle complex subunit 4
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Disease
H02470  Neurodevelopmental disorder with structural brain abnormalities
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    51399 (TRAPPC4)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    51399 (TRAPPC4)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    51399 (TRAPPC4)
SSDB
Motif
Pfam: Sybindin Sedlin_N PDZ_6 PDZ
Other DBs
NCBI-GeneID: 51399
NCBI-ProteinID: NP_057230
OMIM: 610971
HGNC: 19943
Ensembl: ENSG00000196655
UniProt: Q9Y296
Structure
Position
11:119018766..119024134
AA seq 219 aa
MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG
HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA
IGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSDF
ALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGTFGPGS
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcgatttttagtgtgtatgtggtgaacaaagctggcggcttgatttaccagttggac
agctacgcgccacgggctgaggctgagaaaactttcagttatccgctggatctgctgctc
aagctacacgatgagcgtgtgttggttgctttcggccagcgggacggcatccgagtgggt
catgcagtgctggccatcaatggcatggacgtgaatggcaggtacacggccgacgggaaa
gaggtgctggagtatctgggtaaccctgctaattacccggtgtccattcgatttggccgg
ccccgcctcacttctaatgagaagcttatgctggcctccatgttccactcgctctttgcc
atcggctcccagctgtctcctgaacagggaagctcaggcattgagatgctggagacagac
acattcaaattgcactgctaccagacactgacagggatcaagtttgtggttctagcagat
cctaggcaagctggaatagattctcttctccgaaagatttatgagatttactcagacttt
gccctcaagaatccattctattccttagaaatgcctatcaggtgtgagctctttgaccag
aacctgaagctagctctggaggtggcagagaaggctggaacttttggacctgggtcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Network (2)   
   KEGG NETWORK (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (40)   
   RefSeq(nuc) (10)   
   GenBank (15)   
   EMBL (15)   
3D Structure (3)   
   PDB (3)   
Protein domain (4)   
   Pfam (4)   
All databases (97)   

Download RDF
DBGET integrated database retrieval system