KEGG   Homo sapiens (human): 5411
Entry
5411              CDS       T01001                                 
Symbol
PNN, DRS, DRSP, SDK3, memA
Name
(RefSeq) pinin, desmosome associated protein
  KO
K13114  pinin
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    5411 (PNN)
   03015 mRNA surveillance pathway
    5411 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    5411 (PNN)
   03041 Spliceosome [BR:hsa03041]
    5411 (PNN)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     5411 (PNN)
Spliceosome [BR:hsa03041]
 Complex C
  Other components
   EJC/TREX
    5411 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 5411
NCBI-ProteinID: NP_002678
OMIM: 603154
HGNC: 9162
Ensembl: ENSG00000100941
UniProt: Q9H307
Position
14:39175254..39183220
AA seq 717 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIAIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKHVIADQEVMETNRVESVEPSENE
ASKELEPEMEFEIEPDKECKTLSPGKENVSALDMEKESEEKEEKESEPQPEPVAQPQPQS
QPQLQLQSQSQPVLQSQPPSQPEDLSLAVLQPTPQVTQEQGHLLPERKDFPVESVKLTEV
PVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGS
SSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGL
ERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggcggtcgccgtgagaactttgcaggaacagctggaaaaggccaaagagagtcttaag
aacgtggatgagaacattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttatta
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggaccagaagagaatcacgccaggaaagc
gacccggaggatgatgatgttaaaaagccagcattgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggtacccttcaaaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagcggcgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgaaaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttggaacagaaagttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaaaataattaaatatataagaactaagacaaagccccat
ttgttttatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaacgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaatagcgattgttcatagtgatgcagagaaagaacaggaggaggaagaacaaaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgctagagatggttgagaatgtcaaacatgtaatt
gctgaccaggaggtaatggaaactaatcgagttgaaagtgtagaaccttcagaaaatgaa
gctagcaaagaattggaaccagaaatggaatttgaaattgagccagataaagaatgtaaa
accctttctcctgggaaagagaatgtcagtgctttagacatggaaaaggagtctgaggaa
aaagaagaaaaagaatctgagccccaacctgagcctgtggctcaacctcagcctcagtct
cagccccagcttcagcttcaatcccagtcccaaccagtactccagtcccagcctccctct
cagcctgaggatttgtcattagctgttttacagccaacaccccaagttactcaggagcaa
gggcatttactacctgagaggaaggattttcctgtagagtctgtaaaactcactgaggta
ccagtagagccagtcttgacagtacatccagagagcaagagcaaaaccaaaactaggagc
agaagtagaggtcgagctagaaataaaacaagcaagagtagaagtcgaagcagtagcagt
agcagttctagtagcagttcaaccagtagcagcagtggaagtagttccagcagtggaagt
agtagcagtcgcagtagttccagtagcagctccagtacaagtggcagcagcagcagagat
agtagcagtagcactagtagtagtagtgagagtagaagtcggagtaggggccggggacat
aatagagatagaaagcacagaaggagcgtggatcggaagagaagggatacttcaggacta
gaaagaagtcacaaatcttcaaaaggtggtagtagtagagatacaaaaggatcaaaggat
aagaattcccggtccgacagaaagaggtctatatcagagagtagtcgatcaggcaaaaga
tcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (12)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (68)   

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