KEGG   Homo sapiens (human): 5433
Entry
5433              CDS       T01001                                 
Symbol
POLR2D, HSRBP4, HSRPB4, RBP4, RPB16, RPB4
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03020  RNA polymerase
hsa03420  Nucleotide excision repair
hsa05016  Huntington disease
Network
nt06502  Nucleotide excision repair
  Element
N01430  Transcription-coupled NER
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    5433 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    5433 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    5433 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    5433 (POLR2D)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    5433 (POLR2D)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     5433 (POLR2D)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      5433 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 5433
NCBI-ProteinID: NP_004796
OMIM: 606017
HGNC: 9191
Ensembl: ENSG00000144231
UniProt: O15514
Structure
Position
2:complement(127843553..127858155)
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcagcgatccgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcctaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggaacatcgaaagcagcagaatgagagtgcagaggacgaacaggagctctcagaagtc
ttcatgaaaacattaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgttcgtagcttgctactccagaaaaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtccaaggctctaatcccaagcttggaggga
cggtttgaagatgaggagctgcagcagattcttgatgatatccagacaaagcgcagcttt
cagtattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Network (2)   
   KEGG NETWORK (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (13)   
   PDB (13)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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