KEGG   Homo sapiens (human): 5435
Entry
5435              CDS       T01001                                 
Symbol
POLR2F, HRBP14.4, POLRF, RPABC14.4, RPABC2, RPB14.4, RPB6, RPC15
Name
(RefSeq) RNA polymerase II, I and III subunit F
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
hsa  Homo sapiens (human)
Pathway
hsa03020  RNA polymerase
hsa03420  Nucleotide excision repair
hsa04623  Cytosolic DNA-sensing pathway
hsa05016  Huntington disease
Network
nt06502  Nucleotide excision repair
  Element
N01430  Transcription-coupled NER
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    5435 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    5435 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    5435 (POLR2F)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    5435 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    5435 (POLR2F)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    5435 (POLR2F)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     5435 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     5435 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     5435 (POLR2F)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      5435 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 5435
NCBI-ProteinID: NP_068809
OMIM: 604414
HGNC: 9193
Ensembl: ENSG00000100142
UniProt: P61218
Structure
Position
22:37953663..38041915
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaggacaattttgatggcgacgactttgatgatgtggaggaggatgaa
gggctagatgacttggagaatgccgaagaggaaggccaggagaatgtcgagatcctcccc
tctggggagcgaccgcaggccaaccagaagcgaatcaccacaccatacatgaccaagtac
gagcgagcccgcgtgctgggcacccgagcgctccagattgcgatgtgtgcccctgtgatg
gtggagctggagggggagacagatcctctgctcattgccatgaaggaactcaaggcccga
aagatccccatcatcattcgccgttacctgccagatgggagctatgaagactggggggtg
gacgagctcatcatcaccgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Network (2)   
   KEGG NETWORK (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (9)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (40)   
   RefSeq(nuc) (6)   
   GenBank (17)   
   EMBL (17)   
3D Structure (36)   
   PDB (36)   
Protein domain (1)   
   Pfam (1)   
All databases (135)   

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