KEGG   Homo sapiens (human): 54542
Entry
54542             CDS       T01001                                 
Symbol
RC3H2, MNAB, RNF164
Name
(RefSeq) ring finger and CCCH-type domains 2
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    54542 (RC3H2)
   04121 Ubiquitin system [BR:hsa04121]
    54542 (RC3H2)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    54542 (RC3H2)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    54542 (RC3H2)
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-C3HC4_4 Xin zf-C3HC4_2
Other DBs
NCBI-GeneID: 54542
NCBI-ProteinID: NP_001094058
OMIM: 615231
HGNC: 21461
Ensembl: ENSG00000056586
UniProt: Q9HBD1
Structure
Position
9:complement(122844556..122905359)
AA seq 1191 aa
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLISRSTDSTLRALETVKKVGKVGANGQNAAGPSAD
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSPFLTRVPVYPPHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRADFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYVERDRFIVTDLSGHRKHSSTGDLLSLELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGELQSDYTEDATDTKPDRDIELELSALDTDEPDGQSEPIEEIL
DIQLGISSQNDQLLNGMAVENGHPVQQHQKEPPKQKKQSLGEDHVILEEQKTILPVTSCF
SQPLPVSISNASCLPITTSVSAGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcatcgaaaagcttgtccttttgaccagactgccatcaacacagat
attgatgtacttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaattaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgcgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagc
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatgcgagcagctcgttcccttggagaa
agaactgtaacagaactgatattacagcaccagaaccctcagcagttgtctgccaatcta
tgggccgctgtcagggctcgaggatgccagtttttagggccagctatgcaagaagaggcc
ttgaagctggtgttactggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcagagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagagatgaagac
tcttccctaatgcagctgaaggaggaatttcggagttatgaagcattacgcagagaacat
gatgcccaaattgttcatattgccatggaagcaggactccgtatttcacctgaacagtgg
tcctctcttttgtatggtgatttggctcataaatcacacatgcagtctatcattgataag
ctacagtctccagagtcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagacgctgtttcaccaacttgggagcagctggaaaatgcaatggtagct
gttaaaacagtagttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacccctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatttgcga
cagcaagggggttgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgccactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacagggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacagtgtttcccagctaatctcacgtagtactgacagtaccttaagagctctggagacc
gtgaagaaagtgggaaaggttggcgctaatggtcagaatgctgctgggccctctgcagat
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagct
acctcagctgggccctctaatgttggaacagagctgaattctgtgcctcaaaaatccagc
ccatttctaactagagtaccagtatatcctccgcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacaggatactatcca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccagcctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcatctgtctatcagacatctttgcgggaaagatataactcattagat
ggatattattcggtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagat
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctgttcagtgtagactttcgtgcggatttctca
gagagtgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggcaccataggctcctgtataaatgccattgattcagagcccaaagatgtcattgct
aattcaaatgctgtgttaatggacctggacagtggtgatgttaagagaagagtacattta
tttgaaacccagagaaggacaaaagaagaagatccaataattccctttagtgatggaccc
atcatctcaaaatggggtgcgatttccagatcttcccgtacaggttaccataccacagat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaaggtggagttcatatggcaacgaggccacatca
tcagcacactatgttgaaagggacagattcattgttactgatttatctggtcatagaaag
cattccagtactggggaccttttgagccttgaacttcagcaggccaagagcaactcatta
cttcttcagagagaggccaatgctttggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttaaaccttttaagcaaggaaattgaactaagaaatggagagtta
cagagtgattatacagaagatgcaacagatactaaacctgatagggatatcgagttagag
ctttcagcacttgatactgatgaacctgatggacaaagtgaaccaattgaagagatcttg
gacatacagcttggtatcagttctcaaaatgatcagttgctaaatggaatggcagtggaa
aatgggcatccagtacagcagcaccaaaaggagccaccaaagcagaagaaacagagttta
ggtgaagaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgcttt
agccagccactcccagtgtctattagcaatgcaagttgcctccccatcaccacatctgtc
agtgctggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgacttttta
aaacctgttgcaaatgggaagatggttaacagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (36)   
   RefSeq(nuc) (6)   
   GenBank (15)   
   EMBL (15)   
3D Structure (4)   
   PDB (4)   
Protein domain (14)   
   Pfam (14)   
All databases (91)   

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