KEGG   Homo sapiens (human): 55342
Entry
55342             CDS       T01001                                 
Symbol
STRBP, HEL162, ILF3L, SPNR, p74
Name
(RefSeq) spermatid perinuclear RNA binding protein
  KO
K13200  spermatid perinuclear RNA-binding protein
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    55342 (STRBP)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    55342 (STRBP)
SSDB
Motif
Pfam: DZF_N DZF_C dsrm SGP Dicer_dsRBD DUF6857
Other DBs
NCBI-GeneID: 55342
NCBI-ProteinID: NP_060857
OMIM: 611138
HGNC: 16462
Ensembl: ENSG00000165209
UniProt: Q96SI9 V9HWK4
Structure
Position
9:complement(123109494..123268586)
AA seq 672 aa
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNKGTKTEG
ETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNT
VKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELEKKDGEN
VSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERDPTDALSYMTI
QQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSALKRPFE
DGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNESKNETVS
SNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAV
SAAVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMK
FPTYPVPHYSFF
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgagatctattcgatcttttgctaatgatgatcgccatgttatggtgaaacattcaaca
atctatccatctccggaggaacttgaagctgttcagaatatggtatctactgttgaatgt
gctcttaaacatgtctcagattggttggatgaaacaaataaaggcacaaaaacagagggt
gagacagaagtgaagaaagatgaggccggagaaaactattccaaggatcaaggtggtcgg
acattgtgtggtgtaatgaggattggcctggttgcaaaaggcttgctgattaaagatgat
atggacttggagctggttttaatgtgcaaagacaaacccacagagaccctgttaaataca
gtcaaagataatcttcctattcagattcagaaactcacagaagagaaatatcaagtggaa
caatgtgtaaatgaggcatctattataattcggaatacaaaagagcccacgctaactttg
aaggtgatacttacctcacctctaattagggacgaattggagaagaaggatggagaaaat
gtttcgatgaaagatcctccggacttattggacaggcagaaatgcctgaacgccttggcg
tctcttcgacatgccaaatggtttcaggcaagggcaaatggattaaaatcatgtgtaatt
gtcctccgcattctgcgtgatttgtgcaacagagtccccacatgggcaccattgaaagga
tggccactagaacttatatgtgaaaagtctataggtacttgtaatagacctttgggcgct
ggggaggccttgagacgagtaatggagtgtttggcatctggaatactacttcctgggggt
cctggtcttcatgatccttgtgagcgagacccaacagatgctctgagctatatgaccatc
cagcaaaaagaagatattacccacagtgcacagcatgcactcagactatcagcctttggc
cagatttacaaagtgctggagatggacccccttccatctagtaagccttttcagaagtat
tcctggtcagttactgataaagaaggtgctgggtcttcagctctaaagaggccatttgaa
gatggattaggggatgataaagaccccaacaagaagatgaaacgaaacttaaggaaaatt
ctggatagtaaagcaatagaccttatgaatgcactaatgaggctaaatcagatcaggcct
gggcttcagtataagctcctatctcagtctggccccgttcatgccccagtcttcacaatg
tctgtagatgtggatggcacaacatatgaagcctcaggaccatccaagaaaacagcaaaa
cttcacgtagcggtgaaggtattgcaggcaatgggatatccaacaggctttgatgcagat
attgaatgtatgagttccgatgaaaaatcagataatgaaagtaaaaatgaaacagtgtct
tcaaactcaagcaataatactggaaattctacaactgaaacctccagtaccttagaggta
agaactcagggccctatcctcacagcaagtggcaaaaaccctgtaatggagctcaatgaa
aaaagaagaggtctcaagtatgaactcatctcagagactggtggaagccatgacaagcgc
tttgtaatggaggtagaagtagatggacagaaattcagaggcgcaggtccaaataagaaa
gtggcaaaggcgagtgcagctttagctgccttggagaaactgttttctggacccaatgcg
gcaaataataagaaaaagaagattatccctcaggcaaagggcgttgtgaatacagctgtg
tctgcagcagtccaagctgttcggggcagaggaagaggaactctaacaaggggagctttt
gttggggcgacagctgctcctggctacatagctccaggctatggaacaccatatggttac
agcacagctgcccctgcctatggtttacccaagagaatggttctgttacccgttatgaaa
tttccaacatatcctgttccccactactcattcttttag

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (55)   
   RefSeq(nuc) (23)   
   GenBank (16)   
   EMBL (16)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (96)   

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