KEGG   Homo sapiens (human): 55553
Entry
55553             CDS       T01001                                 
Symbol
SOX6, HSSOX6, SOXD, TOLCAS
Name
(RefSeq) SRY-box transcription factor 6
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    55553 (SOX6)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    55553 (SOX6)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 55553
NCBI-ProteinID: NP_001139291
OMIM: 607257
HGNC: 16421
Ensembl: ENSG00000110693
UniProt: P35712
Position
11:complement(15966449..16738477)
AA seq 828 aa
MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS
YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI
LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE
KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGA
TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK
SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE
MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY
GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgtcttccaagcaagccacctctccatttgcctgtgcagctgatggagaggatgcaatg
acccaggatttaacctcaagggaaaaggaagagggcagtgatcaacatgtggcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtc
agtaccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggaa
tcagagaataataagttatgttccctatattccttccgaaatacctctacctcaccacat
aagcctgacgaagggagtcgggaccgtgagataatgaccagtgttacttttggaacccca
gagcgccgcaaagggagtcttgccgatgtggtggacacactgaaacagaagaagcttgag
gaaatgactcggactgaacaagaggattcctcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaataccagtgaacttcttggagaaattaaaggtaca
cctgagagcctggcagaaaaagaacggcagctctccaccatgattacccagctgatcagt
ttacgggagcagctactggcagcgcatgatgaacagaaaaaactggcagcgtcacaaatt
gagaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgcgagacaa
cagcagcaacttctgcaacagcagcacaaaattaatctcctgcagcaacagatccaggtt
cagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggactctggca
gcagctgctgctgcccaacagggattcctcttcccccctggaataacatacaaaccaggt
gataactaccccgtacagttcattccatcaacaatggcagctgctgctgcttctggactc
agccctttacagctccagaagggtcatgtctcccacccacaaattaaccaaaggctaaag
ggcctaagtgaccgttttggcaggaatttggacacctttgaacatggtggtggccactct
tacaaccacaaacagattgagcagctctatgccgctcagctggccagcatgcaggtgtca
cctggagcaaagatgccatcaactccacagccaccaaacacagcagggacggtctcacct
actgggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaagca
gcagcacagcctctgaatctctcatcccgacccaagacagcagagcctgtaaagtcccca
acgtctcccacccagaacctcttcccagccagcaaaaccagccctgtcaatctgccaaac
aaaagcagcatccctagccccattggaggaagcctgggaagaggatcctctttagatatc
ctatctagtctcaactcccctgccctttttggggatcaggatacagtgatgaaagccatt
caggaggcgcggaagatgcgagagcagatccagcgggagcaacagcagcaacagccacat
ggtgttgacgggaaactgtcctccataaataatatggggctgaacagctgcaggaatgaa
aaggaaagaacgcgctttgagaatttggggccccagttaacgggaaagtcaaatgaagat
ggaaaactgggcccaggtgtcatcgaccttactcggccagaagatgcagagggaagtaaa
gcaatgaatggctctgcagctaaactacagcagtattattgttggccaacaggaggtgcc
actgtggctgaagcacgagtctacagggacgcccgcggccgtgccagcagcgagccacac
attaagcgaccaatgaatgcattcatggtttgggcaaaggatgagaggagaaaaatcctt
caggccttccccgacatgcataactccaacattagcaaaatcttaggatctcgctggaaa
tcaatgtccaaccaggagaagcaaccttattatgaagagcaggcccggctaagcaagatc
cacttagagaagtacccaaactataaatacaaaccccgaccgaaacgcacctgcattgtt
gatggcaaaaagcttcggattggggagtataagcaactgatgaggtctcggagacaggag
atgaggcagttctttactgtggggcaacagcctcagattccaatcaccacaggaacaggt
gttgtgtatcctggtgctatcactatggcaactaccacaccatcgcctcagatgacatct
gactgctctagcacctcggccagcccggagcccagcctcccggtcatccagagcacttat
ggtatgaagacagatggcggaagcctagctggaaatgaaatgatcaatggagaggatgaa
atggaaatgtatgatgactatgaagatgaccccaaatcagactatagcagtgaaaatgaa
gccccggaggctgtcagtgccaactga

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Ontology (2)   
   KEGG BRITE (2)   
Disease (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (30)   
   RefSeq(nuc) (6)   
   GenBank (12)   
   EMBL (12)   
Protein domain (2)   
   Pfam (2)   
All databases (57)   

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