KEGG   Homo sapiens (human): 55693
Entry
55693             CDS       T01001                                 
Symbol
KDM4D, JMJD2D
Name
(RefSeq) lysine demethylase 4D
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    55693 (KDM4D)
Enzymes [BR:hsa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     55693 (KDM4D)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     55693 (KDM4D)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    55693 (KDM4D)
SSDB
Motif
Pfam: JmjC JmjN Cytochrome_cB
Other DBs
NCBI-GeneID: 55693
NCBI-ProteinID: NP_060509
OMIM: 609766
HGNC: 25498
Ensembl: ENSG00000186280
UniProt: Q6B0I6
Structure
Position
11:94973709..94999519
AA seq 523 aa
METMKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKAR
ETYDNISEILIATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFED
LERKYWKNRIYNSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYL
YFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGA
FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW
IDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVDHMEPRVPASQELST
QKEVQLPRRAALGLRQLPSHWARHSPWPMAARSGTRCHTLVCSSLPRRSAVSGTATQPRA
AAVHSSKKPSSTPSSTPGPSAQIIHPSNGRRGRGRPPQKLRAQELTLQTPAKRPLLAGTT
CTASGPEPEPLPEDGALMDKPVPLSPGLQHPVKASGCSWAPVP
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggaaactatgaagtctaaggccaactgtgcccagaatccaaattgtaacataatgata
tttcatccaaccaaagaagagtttaatgattttgataaatatattgcttacatggaatcc
caaggtgcacacagagctggcttggctaagataattccacccaaagaatggaaagccaga
gagacctatgataatatcagtgaaatcttaatagccactcccctccagcaggtggcctct
gggcgggcaggggtgtttactcaataccataaaaaaaagaaagccatgactgtgggggag
tatcgccatttggcaaacagtaaaaaatatcagactccaccacaccagaatttcgaagat
ttggagcgaaaatactggaagaaccgcatctataattcaccgatttatggtgctgacatc
agtggctccttgtttgatgaaaacactaaacaatggaatcttgggcacctgggaacaatt
caggacctgctggaaaaggaatgtggggttgtcatagaaggcgtcaatacaccctacttg
tactttggcatgtggaaaaccacgtttgcttggcatacagaggacatggacctttacagc
atcaactacctgcaccttggggagcccaaaacttggtatgtggtgcccccagaacatggc
cagcgcctggaacgcctggccagggagctcttcccaggcagttcccggggttgtggggcc
ttcctgcggcacaaggtggccctcatctcgcctacagttctcaaggaaaatgggattccc
ttcaatcgcataactcaggaggctggagagttcatggtgacctttccctatggctaccat
gctggcttcaaccatggtttcaactgcgcagaggccatcaattttgccactccgcgatgg
attgattatggcaaaatggcctcccagtgtagctgtggggaggcaagggtgaccttttcc
atggatgccttcgtgcgcatcctgcaacctgaacgctatgacctgtggaaacgtgggcaa
gaccgggcagttgtggaccacatggagcccagggtaccagccagccaagagctgagcacc
cagaaggaagtccagttacccaggagagcagcgctgggcctgagacaactcccttcccac
tgggcccggcattccccttggcctatggctgcccgcagtgggacacggtgccacaccctt
gtgtgctcttcactcccacgccgatctgcagttagtggcactgctacgcagccccgggct
gctgctgtccacagctctaagaagcccagctcaactccatcatccacccctggtccatct
gcacagattatccacccgtcaaatggcagacgtggtcgtggtcgccctcctcagaaactg
agagctcaggagctgaccctccagactccagccaagaggcccctcttggcgggcacaaca
tgcacagcttcgggcccagaacctgagcccctacctgaggatggggctttgatggacaag
cctgtaccactgagcccagggctccagcatcctgtcaaggcttctgggtgcagctgggcc
cctgtgccctaa

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Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
3D Structure (283)   
   PDB (283)   
Protein domain (3)   
   Pfam (3)   
All databases (346)   

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