KEGG   Homo sapiens (human): 56001
Entry
56001             CDS       T01001                                 
Symbol
NXF2, CT39, TAPL-2, TCP11X2
Name
(RefSeq) nuclear RNA export factor 2
  KO
K14284  nuclear RNA export factor
Organism
hsa  Homo sapiens (human)
Pathway
hsa03008  Ribosome biogenesis in eukaryotes
hsa03013  Nucleocytoplasmic transport
hsa03015  mRNA surveillance pathway
hsa05014  Amyotrophic lateral sclerosis
hsa05164  Influenza A
hsa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    56001 (NXF2)
   03015 mRNA surveillance pathway
    56001 (NXF2)
   03008 Ribosome biogenesis in eukaryotes
    56001 (NXF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    56001 (NXF2)
   05168 Herpes simplex virus 1 infection
    56001 (NXF2)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    56001 (NXF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    56001 (NXF2)
   03009 Ribosome biogenesis [BR:hsa03009]
    56001 (NXF2)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     56001 (NXF2)
   mRNA cycle factors
    Stress granule specific factors
     56001 (NXF2)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    56001 (NXF2)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 DUF4818
Other DBs
NCBI-GeneID: 56001
NCBI-ProteinID: NP_071336
OMIM: 300315
HGNC: 8072
Ensembl: ENSG00000269405
UniProt: Q9GZY0
Position
X:102247167..102326722
AA seq 626 aa
MCSTLKKCGTYRTEVAECHDHGSTFQGRKKGGSSFRDNFDKRSCHYEHGGYERPPSHCQE
NDGSVEMRDVHKDQQLRHTPYSIRCERRMKWHSEDEIRITTWRNRKPPERKMSQNTQDGY
TRNWFKVTIPYGIKYDKAWLMNSIQSHCSDRFTPVDFHYVRNRACFFVQDASAASALKDV
SYKIYDDENQKICIFVNHSTAPYSVKNKLKPGQMEMLKLTMNKRYNVSQQALDLQNLRFD
PDLMGRDIDIILNRRNCMAATLKIIERNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKT
LNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDGRE
LSAPVIVDIDSSETMKPCKENFTGSETLKHLVLQFLQQYYSIYDSGDRQGLLGAYHDEAC
FSLAIPFDPKDSAPSSLCKYFEDSRNMKTLKDPYLKGELLRRTKRDIVDSLSALPKTQHD
LSSILVDVWCQTERMLCFSVNGVFKEVEGQSQGSVLAFTRTFIATPGSSSSLCIVNDELF
VRDASPQETQSAFSIPVSTLSSSSEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWN
YTRAGQAFTMLQTEGKIPAEAFKQIS
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgtgctctactctaaagaagtgtgggacatacagaactgaagttgcagaatgccatgac
catggtagcacttttcaaggaagaaagaaaggtgggagttctttccgggataattttgac
aagaggagctgtcattatgaacatggtgggtatgagcgcccgccttcacactgccaggag
aatgatggaagcgtggagatgagggatgtccacaaggaccaacaactaagacacactcct
tatagcatccgatgcgaaagaagaatgaaatggcatagtgaagacgaaatccgtattacc
acgtggagaaatagaaaacctccggagagaaaaatgagtcagaacacacaggatggatac
acaaggaactggtttaaggtcacaattccttacgggataaagtatgacaaggcatggcta
atgaattcaatccagagccattgcagtgaccgcttcactccggttgatttccactacgtc
cgaaatcgggcatgcttctttgtccaggatgctagcgctgcctccgcattgaaggatgtc
agttataagatttatgatgatgagaaccaaaagatatgtatatttgtcaatcattctact
gcgccctactctgtgaagaataagttgaagccaggccaaatggagatgctaaagctgacc
atgaacaaacggtacaatgtctcccagcaagctcttgatctccagaatctccgctttgac
ccagacttgatgggccgtgacattgatataatcctgaatcgaagaaactgcatggctgcc
accctgaagatcattgaaagaaatttccctgagctgttgtctttgaacttgtgcaacaac
aagctgtaccagctggatggcctttctgacattacagagaaggctcccaaagtcaagacc
ctgaatctctccaaaaataagctggagtcggcgtgggagttgggcaaggtgaaagggctg
aagctcgaagagctatggctagaagggaacccgttgtgcagcaccttctcggaccagtcc
gcctatgtaagtgccatccgggattgtttccccaagttgttacgcctggacggccgagag
ttatccgcaccagtgattgttgacattgacagctctgagacaatgaaaccctgcaaggaa
aactttactggatctgagaccctaaagcatttagtcctgcaattcctgcagcagtattac
tcgatctatgactctggagatcgacagggtctcctcggtgcttaccacgatgaggcctgc
ttctccttggctattcccttcgaccccaaggactcagccccgagcagcttgtgcaagtac
tttgaggatagcaggaatatgaaaacactcaaggacccctacctgaagggggaactgctg
aggcgcacaaaacgtgacattgtggactccctcagtgcgttgcccaaaactcagcatgac
ctcagctccatcctggtggacgtgtggtgccagacggaaaggatgctctgcttttctgtc
aatggggttttcaaggaagtggaaggacagtctcagggttctgttctcgccttcacccgg
accttcattgctacccctggcagcagttccagtctgtgcatcgtgaatgacgagctgttt
gtgagggatgccagcccccaagagactcagagtgccttctccatcccagtgtccacactc
tcctccagctctgagccctccctctcccaggagcagcaggaaatggtgcaggctttctct
gcccagtctgggatgaaactggagtggtctcagaagtgccttcaggacaatgagtggaac
tacactagagctggccaggccttcactatgctccagaccgagggcaagatccccgcggag
gccttcaagcaaatctcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (6)   
   Pfam (6)   
All databases (60)   

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