KEGG   Homo sapiens (human): 56104
Entry
56104             CDS       T01001                                 
Symbol
PCDHGB1, PCDH-GAMMA-B1
Name
(RefSeq) protocadherin gamma subfamily B, 1
  KO
K16496  protocadherin gamma subfamily B
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    56104 (PCDHGB1)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   56104 (PCDHGB1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail Cadherin_3
Other DBs
NCBI-GeneID: 56104
NCBI-ProteinID: NP_061745
OMIM: 606299
HGNC: 8708
Ensembl: ENSG00000254221
UniProt: Q9Y5G3
Position
5:141350099..141512975
AA seq 927 aa
MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP
TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI
QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK
ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS
QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT
VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA
TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN
GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA
NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF
ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE
GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD
PSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
NAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgcagagagccagagaagccgaaatgatgaaaagtcaggtactgtttcccttcctgctg
tctttgttctgcggggccatctcccagcagatccgatacacgattccagaggagctagcc
aacggctcacgggtggggaaacttgccaaggatctggggctcagtgtccgggagttgcca
actcgaaaactgcgggttagtgcagaggattatttcaacgttagtttggagagcggggat
ttgttagtgaacggtaggatagatcgagagaagatttgcggaaggaaacttgagtgtgca
ctagaattcgaaacggtcgctgaaaacccaatgaatgttttccacgtggttgttgtaatc
caagatattaatgacaatgcaccacgtttcgttgcaaaaggcattgacttagaaatttgt
gagtcagccttacccggggtaaaattctctctggattctgctcaagatgcagatgtggaa
ggcaattcactgaagttatacaccatcaaccccaatcaatacttctctctgtcaacgaag
gaaagtcctgatggaagtaaatatccggtattactgctggaaaaacctctagacagggaa
catcagagctctcatcgcttaatcctgactgccatggatggcggggacccgcctctaagc
ggcaccacccatatctggatccgagttacggatgccaatgataatgctcccgtgtttagc
caggaggtatacagggttagcctccaagaaaacgtaccgtggggaacctccgtgctgcgg
gtgatggccacagaccaggatgagggcattaatgcagagatcacctatgccttcctcaat
tccccaataagtaccagcctcttcaatctcaatccaaatactggcgacatcacaaccaat
ggcacattggattttgaagagacaagtagatatgtgttgagtgtggaagctaaggatgga
ggagtacacacagctcactgtaatgttcaaatagaaattgttgacgagaatgacaatgcc
ccagaggtgacattcatgtccttctctaaccagattccagaggattcagaccttggaact
gtaatagccctcataaaagtgcgagacaaggattctgggcaaaatggcatggtgacatgc
tatactcaggaagaagttcctttcaaattagaatccacctcgaagaattattacaagctg
gtgattgctggagccctaaaccgggagcagacagcagactacaacgtcacaatcatagcc
accgacaagggcaaaccagccctttcctccaggacaagcatcaccctgcacatctccgac
atcaacgacaatgcacctgttttccatcaggcctcctatgtggtccacgtgtctgagaac
aacccacctggcgcctccattgcacaagtaagcgcctccgacccggatttgggacccaac
ggcagagtctcctactctattctggccagtgacctggagccgcgggagctgttgtcctac
gtgtccgtgagcccgcagagcggggtggtgttcgcgcagcgcgccttcgaccacgagcag
ctgcgcgccttcgagctcacactgcaggccagggaccagggctcccccgcgctcagcgcc
aacgtgagcctgcgcgtgttggtgggcgacctcaatgacaatgcgccacgggtgctgtac
cccgcgctggggcctgatggctccgccctcttcgatatggtgccacgcgccgcagagccc
ggctacctggtgaccaaggtggtggcggtggacgcagactcaggacacaacgcttggctg
tcctaccacgtgctgcaggccagcgagcccgggctcttcagcctggggttgcgcacgggt
gaggtgcgcacagcgcgtgccttgggcgacagggacgcggcccgccagcgcctgctggtc
gctgtgcgtgatggaggacagccgccactctccgccaccgccacgctgcacctaatcttc
gcggatagcctgcaagaggtattgccagacctcagcgaccgccctgagccctctgacccc
cagacggaactgcagttttacctggttgtggccttggccttgatctcagtgctctttctc
ctcgcggtgattctagcgatcgccctgcgcctgcgacgttcctccagcctcgacactgag
ggctgctttcaaaccggtctctgctccaagtctgggcccggggttcctcccaaccacagc
gaggggactttgccctattcctacaatctatgtattgcctctcattctgcaaagacagag
tttaattctctcaacctgacaccggaaatggctccccctcaggatctgctgtgtgatgat
ccttctatggttgtatgtgccagtaatgaagatcacaaaatcgcttatgacccttctttg
tcttcgcaccaagccccgcccaacacggactggcgtttctctcaggcccagagacccggc
accagcggctcccaaaatggcgatgacaccggcacctggcccaacaaccagtttgacaca
gagatgctgcaagccatgatcttggcgtccgccagtgaagctgctgatgggagctccacc
ctgggagggggtgccggcaccatgggattgagcgcccgctacggaccccagttcaccctg
cagcacgtgcccgactaccgccagaatgtctacatcccaggcagcaatgccacactgacc
aacgcagctggcaagcgggatggcaaggccccagcaggtggcaatggcaacaagaagaag
tcgggcaagaaggagaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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