KEGG   Homo sapiens (human): 56114
Entry
56114             CDS       T01001                                 
Symbol
PCDHGA1, PCDH-GAMMA-A1
Name
(RefSeq) protocadherin gamma subfamily A, 1
  KO
K16495  protocadherin gamma subfamily A
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    56114 (PCDHGA1)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   56114 (PCDHGA1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail Cadherin_3 RET_CLD1
Other DBs
NCBI-GeneID: 56114
NCBI-ProteinID: NP_061735
OMIM: 606288
HGNC: 8696
Ensembl: ENSG00000204956
UniProt: Q9Y5H4
Position
5:141330514..141512975
AA seq 931 aa
MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA
DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE
VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL
DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP
AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE
ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF
PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI
TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD
SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP
PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH
KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgaagattcagaaaaagctgactggctgcagcaggctgatgcttctgtgtctttctctg
gagctgctgttggaagctggggctgggaatattcactactcagtgccggaagagacagac
aaaggttccttcgtaggcaacatcgccaaggacctagggctgcaaccccaggagctggca
gatggcggagtccgcatcgtctccagaggtaggatgccgcttttcgctctgaatcctaga
agtggcagcttgatcaccgcgcgcaggatagaccgggaggagctctgcgctcagagcatg
ccgtgtctcgtgagttttaatatccttgttgaggataaaatgaagctttttcctgttgaa
gtagaaataattgatattaatgacaacactccccaattccagttagaggaactggagttt
aaaatgaatgaaataacgactccaggtaccagagtctcattgccttttgggcaagacctt
gatgtgggtatgaactcactccagagctaccaactcagctctaaccctcatttctccctg
gatgtgcaacagggagccgatgggcctcaacatccagagatggtgctgcagagtccctta
gacagagaagaagaagctgtccaccacctcatcctcacagcttctgatgggggtgaacca
gtccgttcagggaccctcagaatttacattcaggtggtggatgcaaatgacaatcctcca
gcatttactcaggcacaataccatataaatgtccccgaaaacgtgccgctgggtactcag
ctgctcatggtaaatgccactgaccctgatgagggagccaatggggaagtaacgtactcc
tttcacaatgtagaccacagagtggcccaaatatttcgtttagattcttacacaggagaa
atatcaaataaagaaccactagatttcgaagaatacaaaatgtattcaatggaagttcaa
gcccaggatggtgcggggctcatggctaaagttaaggtactgatcaaagttttggatgta
aatgataatgccccagaagtgaccatcacctctgtcaccactgcagttccagaaaacttt
cctcctgggaccataattgctcttatcagtgtgcatgaccaggactcaggagacaatggc
tacaccacatgtttcattcctggaaatttaccctttaaattggaaaagttagttgataat
tattaccgtttagtgactgaaagaacactggacagagaacttatctctgggtacaacatc
acaataacagcaatagaccaaggaactccagctctatctactgaaactcacatttcacta
ctagtgacagatatcaatgacaactccccagtcttccatcaggactcctactctgcctac
attcccgaaaacaaccccagaggagcctccatcttctctgtgagggcccacgacttggac
agcaatgagaatgcacaaatcacttactccctaatagaggacactatccagggggcaccc
ctatctgcctacctctccatcaactccgacactggggtcctgtatgcgctgcgatccttc
gactatgagcagttccgggacatgcaactgaaagtgatggcgcgggacagtggggatccg
cccctcagcagcaacgtgtctctcagcctattcctgctggaccagaacgacaacgcgccc
gagatcctgtaccccgccctccccacagatggttctaccggcgtggagctggcgcccctc
tccgcagagcccggctacctggtgaccaaggtggtggcggtggacagagactcgggccag
aacgcctggctgtcctaccgcctgctcaaggccagcgagccgggactcttctcggtgggt
ctgcacacgggcgaggtgcgcacggcgcgagccctgctggacagagacgcgctcaagcag
agtctcgtggtggccgtccaggaccacggccagcccccgctctccgccactgtcacgctc
accgtggccgtggccgacaggatctccgacatcctggccgacctgggcagcctcgagccc
tccgccaaacccaacgattcggacctcactctgtacctggtggtggcggcggccgcggtc
tcctgcgtcttcctggccttcgtcatcgtgctgctggcgcacaggctgcggcgctggcac
aagtcacgtctgctacaggcttcgggaggcggcttagcgagcatgcccggttcgcacttt
gtgggcgtggacggggttcgggctttcctgcagacctattcccacgaggtctccctcact
gcggactcgcggaagagccacctgattttcccccagcccaactatgcggacacactcatc
agccaggagagctgtgagaaaaagggttttctatcagcaccccagtctttacttgaagac
aaaaaggaaccattttctcagcaagccccgcccaacacggactggcgtttctctcaggcc
cagagacccggcaccagcggctcccaaaatggcgatgacaccggcacctggcccaacaac
cagtttgacacagagatgctgcaagccatgatcttggcgtccgccagtgaagctgctgat
gggagctccaccctgggagggggtgccggcaccatgggattgagcgcccgctacggaccc
cagttcaccctgcagcacgtgcccgactaccgccagaatgtctacatcccaggcagcaat
gccacactgaccaacgcagctggcaagcgggatggcaaggccccagcaggtggcaatggc
aacaagaagaagtcgggcaagaaggagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system