KEGG   Homo sapiens (human): 6293
Entry
6293              CDS       T01001                                 
Symbol
VPS52, ARE1, SAC2, SACM2L, dJ1033B10.5
Name
(RefSeq) VPS52 subunit of GARP complex
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    6293 (VPS52)
Membrane trafficking [BR:hsa04131]
 Protein recycling
  Others
   EARP complex
    6293 (VPS52)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    6293 (VPS52)
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC Dor1 Sec3_C-term COG6_N ATG16
Other DBs
NCBI-GeneID: 6293
NCBI-ProteinID: NP_072047
OMIM: 603443
HGNC: 10518
Ensembl: ENSG00000223501
UniProt: Q8N1B4 Q4VXZ2 B3KMF7
Position
6:complement(33250272..33271965)
AA seq 723 aa
MAAAATMAAAARELVLRAGTSDMEEEEGPLAGGPGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLSMTLKHLDSYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggccgccgctgcgaccatggcggctgcggcccgggaactggtgttgcgggctgggacc
tcagatatggaggaggaagagggcccgctggcgggtggtcctgggctccaggaaccactg
caacttggggagttggatatcacttctgatgaattcatcctggatgaagtggatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtagatctc
cgtcactattcaaagcaagttgagctggagctacagcagattgaacagaaatccattcgg
gattatattcaagagagtgagaatatagcatctctacacaaccagatcacagcctgtgat
gctgtcctggagcgaatggagcagatgttgggagcttttcagagtgacctcagctccatc
agctctgagatccggacactgcaggaacagtcaggagccatgaacattcgacttcgaaat
cgccaggcagttcgggggaaacttggggagcttgttgatggtctggtggtgccttctgct
ctggtcacggcaattctggaggctccagtgacagagcccaggttcttggagcagctacag
gagctggatgccaaggcagccgcagtcagagagcaggaagctagaggcacagcagcctgc
gcagatgtcagaggcgtgctcgatcggctccgggtcaaggcagtgacgaagatccgagag
tttatcctccagaagatttattccttcaggaaacccatgaccaactatcagatcccccag
acggccctgctgaagtacaggttcttctatcagtttctgctgggcaatgaacgagcaaca
gcaaaggagatcagggatgaatatgtggagacgctgagcaagatttacctgtcttactac
cgctcttacctggggcggctcatgaaggtgcagtatgaggaagtcgctgagaaagatgat
ctaatgggtgtggaagatacagcaaagaaaggattcttctcaaagccatcgctccgcagc
aggaacaccattttcaccctaggaacccgcggctctgtcatctcccccactgaacttgag
gcccccatcctggtgcctcacacagcgcagcgcggagagcagaggtatccatttgaggcc
ctcttccgcagccagcactacgccctcctagacaattcctgccgcgaataccttttcatc
tgtgaattttttgttgtgtctggcccagctgcacacgacctgttccatgctgtcatgggc
cgtacactcagcatgaccctgaaacacctggattcttatctagctgactgctacgatgcc
attgctgtttttctctgtatccacattgttctccggttccgtaacattgcagcaaagagg
gatgttcctgccctggacaggtactgggaacaggtgcttgccttgctatggccacggttt
gaactgatcctggagatgaatgttcagagcgtccgaagcactgacccccagcgcctaggg
gggttggatactcggccccactatatcacacgccgctatgcagagttctcctccgctctt
gtcagtatcaaccagacaattcctaatgaacggaccatgcaattgctgggacagctgcag
gtggaggtggagaattttgtcctccgagtggcagctgagttctcctcaaggaaggagcag
cttgtgtttctgatcaacaactatgacatgatgctgggtgtgctgatggagcgggctgca
gatgacagcaaagaggttgagagcttccagcagctgctcaatgctcggacacaggaattc
attgaagagttgctgtctcccccttttgggggtttagtggcatttgtgaaggaggctgag
gctttgattgagcgtggacaggctgagcgacttcgaggggaagaagcccgggtaactcag
ctgatccgtggctttggtagttcctggaaatcatcagtggaatctctgagtcaggatgta
atgcggagtttcaccaacttcagaaatggcaccagtatcattcagggagcgctgacccag
ctgatccagctctatcatcgcttccaccgggtgctgtcccagccgcagctccgagccctc
cctgcccgggctgagctcatcaacattcaccaccttatggtggagctcaagaagcataag
cccaacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (11)   
   OC (1)   
Protein sequence (36)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (32)   
DNA sequence (70)   
   RefSeq(nuc) (32)   
   GenBank (19)   
   EMBL (19)   
Protein domain (7)   
   Pfam (7)   
All databases (140)   

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