KEGG   Homo sapiens (human): 64321
Entry
64321             CDS       T01001                                 
Symbol
SOX17, VUR3
Name
(RefSeq) SRY-box transcription factor 17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
hsa  Homo sapiens (human)
Pathway
hsa04310  Wnt signaling pathway
Disease
H01037  Vesicoureteral reflux
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    64321 (SOX17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    64321 (SOX17)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    64321 (SOX17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HTH_24
Other DBs
NCBI-GeneID: 64321
NCBI-ProteinID: NP_071899
OMIM: 610928
HGNC: 18122
Ensembl: ENSG00000164736
UniProt: Q9H6I2
Structure
Position
8:54457935..54460892
AA seq 414 aa
MSSPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAP
MPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHVYYGAM
GSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVDR
TEFEQYLHFVCKPEMGLPYQGHDSGVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagacccagagcgcgctg
cccgcggtgatggccgggctgggcccctgcccctgggccgagtcgctgagccccatcggg
gacatgaaggtgaagggcgaggcgccggcgaacagcggagcaccggccggggccgcgggc
cgagccaagggcgagtcccgtatccggcggccgatgaacgctttcatggtgtgggctaag
gacgagcgcaagcggctggcgcagcagaatccagacctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gcagagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctggct
gagccgcaggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctccagttccccgagcagggcttccccgccggcccgccgctgctgcctccgcacatgggc
ggccactaccgcgactgccagagtctgggcgcgcctccgctcgacggctacccgttgccc
acgcccgacacgtccccgctggacggcgtggaccccgacccggctttcttcgccgccccg
atgcccggggactgcccggcggccggcacctacagctacgcgcaggtctcggactacgct
ggccccccggagcctcccgccggtcccatgcacccccgactcggcccagagcccgcgggt
ccctcgattccgggcctcctggcgccacccagcgcccttcacgtgtactacggcgcgatg
ggctcgcccggggcgggcggcgggcgcggcttccagatgcagccgcaacaccagcaccag
caccagcaccagcaccaccccccgggccccggacagccgtcgccccctccggaggcactg
ccctgccgggacggcacggaccccagtcagcccgccgagctcctcggggaggtggaccgc
acggaatttgaacagtatctgcacttcgtgtgcaagcctgagatgggcctcccctaccag
gggcatgactccggtgtgaatctccccgacagccacggggccatttcctcggtggtgtcc
gacgccagctccgcggtatattactgcaactatcctgacgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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