KEGG   Homo sapiens (human): 64848
Entry
64848             CDS       T01001                                 
Symbol
YTHDC2, CAHL, hYTHDC2
Name
(RefSeq) YTH N6-methyladenosine RNA binding protein C2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:3.6.4.13]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    64848 (YTHDC2)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     64848 (YTHDC2)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    64848 (YTHDC2)
SSDB
Motif
Pfam: YTH HA2_C Helicase_C OB_NTP_bind R3H DEAD HA2_N Ank_2 AAA_19 nSTAND3 AAA_22 Ank ATPase PhoH AAA_16 AAA_7 UvrD-helicase AAA_29 Ank_4 T2SSE SRP54 AAA_23
Other DBs
NCBI-GeneID: 64848
NCBI-ProteinID: NP_073739
OMIM: 616530
HGNC: 24721
Ensembl: ENSG00000047188
UniProt: Q9H6S0
Structure
Position
5:113513694..113595284
AA seq 1430 aa
MSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF
GSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQEN
SFKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHK
DIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNG
WMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFD
DEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFM
LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFV
TMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHT
KLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPH
LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMAL
LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD
VNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPA
NGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSF
RVDGIPNDSSDSEMEDKTTANLAALKLDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRA
PSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRK
SSADTEFSDECTTAERVLMKSPSPALHPPQKYKDRGILHPKRGTEDRSDQSSLKSTDSSS
YPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKL
NRAFWESSIVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLP
FQFAHHLLNPWNDNKKVQISRDGQELEPLVGEQLLQLWERLPLGEKNTTD
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgtccaggccgagcagcgtctccccgcggcagccggctcctggcggtggcggaggcggc
ggcccctcgccttgtggccctgggggcggcggccgggccaaggggctgaaggacattcgc
attgatgaggaggtgaagatcgcagtcaatatcgcgctggagcgcttccgatacggggac
cagagagaaatggaatttccttcttctttgaccagtactgaaagagcctttattcatcga
ctcagtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtacagaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatccgaatttgattcttttaggcagtctttaccagtgtttgagaaacaggaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagaccacacagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtactcaaccaagacgattggcagctatcgctgtggctgaaagagtt
gccgcagagagacgggaaaggattggtcaaacaattggttatcagatccgattagaaagc
agggtttctccaaagacacttctgacattttgtactaatggggtattgcttcgtacattg
atggcaggagatagtacgttgtcgactgtgacacatgttatcgtggatgaagtgcatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcaccca
actttgaaactaattctttctagtgctgccttggatgtaaatctctttataagatatttt
ggaagttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagatattttaagaacaactggatatacaaacaaagaaatgttaaaatataaaaaggaa
aaacagcaagaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaat
agtttcaagcctgaatctcagaggcagagaactgttctaaatgtgactgatgagtatgac
ttactggatgatggtggtgatgctgtcttcagtcagctgactgaaaaagatgtgaattgc
cttgaaccatggttaataaaggaaatggatgcttgcctttctgatatatggctacataaa
gatattgatgcctttgctcaggtctttcatctcattttaactgaaaatgttagtgttgat
tacagacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgtggctttgca
agtcaagtagaacagttaatcagtatgggagccaatgtccatagtaaagcatcaaatggc
tggatggcattggattgggctaaacactttgggcagactgaaattgtggatcttctagaa
tcttacagtgctacactggaatttggaaatctagatgaaagttctctggttcaaacaaat
ggaagtgacctcagtgctgaagacagagagctcctgaaagcttatcatcatagtttcgat
gatgaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgt
gatgctggtgcagtactaatttttctgcctggatatgacgaaattgttggactgagagat
cgcatcctgtttgatgacaagcggtttgctgacagtacacatagataccaagtctttatg
cttcattcaaatatgcaaacatccgatcaaaagaaagtattaaaaaacccacctgcaggt
gttcgaaaaataattctttccaccaatattgctgaaaccagcatcacagtcaatgatgtt
gtctttgttattgattctggtaaggtgaaagagaaatcctttgatgctctgaattttgtt
acaatgttaaaaatggtatggatttccaaagctagtgccatacagcggaaaggcagggca
gggcgatgtagacctggaatttgttttcgtctgttcagtagactccgattccagaatatg
ttggaatttcagactccggaacttttgagaatgccattacaggaactttgcttacatacc
aagctgttagccccagttaattgtcccattgctgattttcttatgaaagctcctgaacct
ccaccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatggat
acatgggaagatctgactgaacttgggtatcatttggctgacttgccagtagaaccacat
cttggtaaaatggtcttgtgtgctgttgttttaaagtgtctggaccccatccttacaatt
gcttgcacactagcttatcgagatccttttgtactacctactcaggcctctcaaaaacgt
gcagctatgctttgtaggaaacgttttactgcaggagctttcagtgaccatatggcactt
ctcagagcattccaggcctggcaaaaagcacgaagtgatgggtgggagcgagccttttgt
gaaaagaattttctttcacaggctactatggaaataatcataggcatgagaacacagttg
cttggtcaacttagagcatcaggttttgttagagcacgaggtggtggtgacattcgggac
gttaacacaaactctgagaattgggctgtcgttaaagctgcattggtggcaggcatgtat
cctaatttagtccacgtggacagagagaatctagtgttgacagggccaaaggagaaaaaa
gtacgatttcatcctgcttcagttctcagtcagcctcaatataaaaagattcctccagcc
aatggtcaagctgcagcaattaaggcactgcccacagattggcttatttatgatgaaatg
accagagcccatagaatagctaatattagatgttgttcagcagtgacgcctgtcactata
ttggtattctgtggaccagctagattggcaagtaatgctcttcaggaaccttcatccttt
agagtggatggcattcccaatgacagtagtgatagtgaaatggaggacaaaactacagct
aatttggcagccttgaaacttgatgagtggctccatttcacactggagccagaggcagct
agtttattgctgcagctcagacagaagtggcatagcttatttttacgccgaatgagagct
ccatctaaaccttggtctcaagttgatgaagctaccataagagcaattatagctgtttta
agcactgaagaacagtctgcaggtttacaacaaccatctgggattggccaaaggccaagg
cctatgtcttcagaagagcttcctttggcctcatcttggaggtcaaataatagtaggaaa
agttcagcagatactgaattttctgatgagtgtactactgcagaaagagtactgatgaaa
tctccatctccagcattacacccacctcagaagtacaaagatagaggaattttacatcct
aaacgaggtactgaggaccgatcagatcagtcttctctgaaatctacagacagcagtagt
tacccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctcct
tcgccaagaccaaacatgcctgttcgatacttcataatgaagagtagcaatttgagaaac
cttgaaatttctcaacagaagggtatctggtctacaactcctagtaatgaacggaagcta
aatcgagccttttgggaaagcagcatagtttacttggtattttctgttcaaggatctgga
catttccagggattttctaggatgtcttctgagattggaagggaaaagagtcaggactgg
ggctctgctggactaggaggagtatttaaggtggagtggatacgaaaagaaagccttccc
tttcaatttgcacaccatttactcaatccatggaatgacaacaagaaagtgcagataagc
agggatgggcaggaactagaacctctggttggtgaacagttgctccagttatgggaacgt
cttcccttgggagaaaaaaacacaactgattga

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