Entry |
|
Symbol |
SMARCA2, BAF190, BIS, BRM, NCBRS, SNF2, SNF2L2, SNF2LA, SWI2, Sth1p, hBRM, hSNF2a
|
Name |
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
|
KO |
K11647 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] |
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Organism |
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Pathway |
hsa03082 | ATP-dependent chromatin remodeling |
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Network |
|
Element |
N01688 | ADRB3-UCP1 signaling pathway |
|
Disease |
H01402 | Nicolaides-Baraitser syndrome |
|
Brite |
KEGG Orthology (KO) [BR:hsa00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6595 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
6595 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
6595 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hsa03021]
6595 (SMARCA2)
03036 Chromosome and associated proteins [BR:hsa03036]
6595 (SMARCA2)
Transcription machinery [BR:hsa03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
6595 (SMARCA2)
Chromosome and associated proteins [BR:hsa03036]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
6595 (SMARCA2)
Chromatin remodeling factors
BAF complex
6595 (SMARCA2)
PBAF complex
6595 (SMARCA2)
GBAF(ncBAF) complex
6595 (SMARCA2)
|
SSDB |
|
Motif |
|
Other DBs |
|
Structure |
|
Position |
9:2015347..2193624
|
AA seq |
1590 aa
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ
QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA
AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE
LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR
QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV
ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL
TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT
ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI
LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI
NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV
PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE
KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY
MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT
IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT
VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR
RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL
TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP
PKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK
SARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNR
GKAKPVVSDFDSDEEQDEREQSEGSGTDDE |
NT seq |
4773 nt +upstreamnt +downstreamnt
atgtccacgcccacagaccctggtgcgatgccccacccagggccttcgccggggcctggg
ccttcccctgggccaattcttgggcctagtccaggaccaggaccatccccaggttccgtc
cacagcatgatggggccaagtcctggacctccaagtgtctcccatcctatgccgacgatg
gggtccacagacttcccacaggaaggcatgcatcaaatgcataagcccatcgatggtata
catgacaaggggattgtagaagacatccattgtggatccatgaagggcactggtatgcga
ccacctcacccaggcatgggccctccccagagtccaatggatcaacacagccaaggttat
atgtcaccacacccatctccattaggagccccagagcacgtctccagccctatgtctgga
ggaggcccaactccacctcagatgccaccaagccagccgggggccctcatcccaggtgat
ccgcaggccatgagccagcccaacagaggtccctcacctttcagtcctgtccagctgcat
cagcttcgagctcagattttagcttataaaatgctggcccgaggccagcccctccccgaa
acgctgcagcttgcagtccaggggaaaaggacgttgcctggcttgcagcaacaacagcag
cagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagccgcag
cagcagccgccgcaaccacagacgcagcaacaacagcagccggcccttgttaactacaac
agaccatctggcccggggccggagctgagcggcccgagcaccccgcagaagctgccggtg
cccgcgcccggcggccggccctcgcccgcgccccccgcagccgcgcagccgcccgcggcc
gcagtgcccgggccctcagtgccgcagccggccccggggcagccctcgcccgtcctccag
ctgcagcagaagcagagccgcatcagccccatccagaaaccgcaaggcctggaccccgtg
gaaattctgcaagagcgggaatacagacttcaggcccgcatagctcataggatacaagaa
ctggaaaatctgcctggctctttgccaccagatttaagaaccaaagcaaccgtggaacta
aaagcacttcggttactcaatttccagcgtcagctgagacaggaggtggtggcctgcatg
cgcagggacacgaccctggagacggctctcaactccaaagcatacaaacggagcaagcgc
cagactctgagagaagctcgcatgaccgagaagctggagaagcagcagaagattgagcag
gagaggaaacgccgtcagaaacaccaggaatacctgaacagtattttgcaacatgcaaaa
gattttaaggaatatcatcggtctgtggccggaaagatccagaagctctccaaagcagtg
gcaacttggcatgccaacactgaaagagagcagaagaaggagacagagcggattgaaaag
gagagaatgcggcgactgatggctgaagatgaggagggttatagaaaactgattgatcaa
aagaaagacaggcgtttagcttaccttttgcagcagaccgatgagtatgtagccaatctg
accaatctggtttgggagcacaagcaagcccaggcagccaaagagaagaagaagaggagg
aggaggaagaagaaggctgaggagaatgcagagggtggggagtctgccctgggaccggat
ggagagcccatagatgagagcagccagatgagtgacctccctgtcaaagtgactcacaca
gaaaccggcaaggttctgttcggaccagaagcacccaaagcaagtcagctggacgcctgg
ctggaaatgaatcctggttatgaagttgcccctagatctgacagtgaagagagtgattct
gattatgaggaagaggatgaggaagaagagtccagtaggcaggaaaccgaagagaaaata
ctcctggatccaaatagcgaagaagtttctgagaaggatgctaagcagatcattgagaca
gctaagcaagacgtggatgatgaatacagcatgcagtacagtgccaggggctcccagtcc
tactacaccgtggctcatgccatctcggagagggtggagaaacagtctgccctcctaatt
aatgggaccctaaagcattaccagctccagggcctggaatggatggtttccctgtataat
aacaacttgaacggaatcttagccgatgaaatggggcttggaaagaccatacagaccatt
gcactcatcacttatctgatggagcacaaaagactcaatggcccctatctcatcattgtt
cccctttcgactctatctaactggacatatgaatttgacaaatgggctccttctgtggtg
aagatttcttacaagggtactcctgccatgcgtcgctcccttgtcccccagctacggagt
ggcaaattcaatgtcctcttgactacttatgagtatattataaaagacaagcacattctt
gcaaagattcggtggaaatacatgatagtggacgaaggccaccgaatgaagaatcaccac
tgcaagctgactcaggtcttgaacactcactatgtggcccccagaaggatcctcttgact
gggaccccgctgcagaataagctccctgaactctgggccctcctcaacttcctcctccca
acaatttttaagagctgcagcacatttgaacaatggttcaatgctccatttgccatgact
ggtgaaagggtggacttaaatgaagaagaaactatattgatcatcaggcgtctacataag
gtgttaagaccatttttactaaggagactgaagaaagaagttgaatcccagcttcccgaa
aaagtggaatatgtgatcaagtgtgacatgtcagctctgcagaagattctgtatcgccat
atgcaagccaaggggatccttctcacagatggttctgagaaagataagaaggggaaagga
ggtgctaagacacttatgaacactattatgcagttgagaaaaatctgcaaccacccatat
atgtttcagcacattgaggaatcctttgctgaacacctaggctattcaaatggggtcatc
aatggggctgaactgtatcgggcctcagggaagtttgagctgcttgatcgtattctgcca
aaattgagagcgactaatcaccgagtgctgcttttctgccagatgacatctctcatgacc
atcatggaggattattttgcttttcggaacttcctttacctacgccttgatggcaccacc
aagtctgaagatcgtgctgctttgctgaagaaattcaatgaacctggatcccagtatttc
attttcttgctgagcacaagagctggtggcctgggcttaaatcttcaggcagctgataca
gtggtcatctttgacagcgactggaatcctcatcaggatctgcaggcccaagaccgagct
caccgcatcgggcagcagaacgaggtccgggtactgaggctctgtaccgtgaacagcgtg
gaggaaaagatcctcgcggccgcaaaatacaagctgaacgtggatcagaaagtgatccag
gcgggcatgtttgaccaaaagtcttcaagccacgagcggagggcattcctgcaggccatc
ttggagcatgaggaggaaaatgaggaagaagatgaagtaccggacgatgagactctgaac
caaatgattgctcgacgagaagaagaatttgacctttttatgcggatggacatggaccgg
cggagggaagatgcccggaacccgaaacggaagccccgtttaatggaggaggatgagctg
ccctcctggatcattaaggatgacgctgaagtagaaaggctcacctgtgaagaagaggag
gagaaaatatttgggagggggtcccgccagcgccgtgacgtggactacagtgacgccctc
acggagaagcagtggctaagggccatcgaagacggcaatttggaggaaatggaagaggaa
gtacggcttaagaagcgaaaaagacgaagaaatgtggataaagatcctgcaaaagaagat
gtggaaaaagctaagaagagaagaggccgccctcccgctgagaaactgtcaccaaatccc
cccaaactgacaaagcagatgaacgctatcatcgatactgtgataaactacaaagatagg
tgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagttcaggg
cgacagctcagtgaagtcttcattcagttaccttcaaggaaagaattaccagaatactat
gaattaattaggaagccagtggatttcaaaaaaataaaggaaaggattcgtaatcataag
taccggagcctaggcgacctggagaaggatgtcatgcttctctgtcacaacgctcagacg
ttcaacctggagggatcccagatctatgaagactccatcgtcttacagtcagtgtttaag
agtgcccggcagaaaattgccaaagaggaagagagtgaggatgaaagcaatgaagaggag
gaagaggaagatgaagaagagtcagagtccgaggcaaaatcagtcaaggtgaaaattaag
ctcaataaaaaagatgacaaaggccgggacaaagggaaaggcaagaaaaggccaaatcga
ggaaaagccaaacctgtagtgagcgattttgacagcgatgaggagcaggatgaacgtgaa
cagtcagaaggaagtgggacggatgatgagtga |