KEGG   Homo sapiens (human): 6659
Entry
6659              CDS       T01001                                 
Symbol
SOX4, CSS10, EVI16
Name
(RefSeq) SRY-box transcription factor 4
  KO
K23581  transcription factor SOX4 (SOX group C)
Organism
hsa  Homo sapiens (human)
Pathway
hsa05206  MicroRNAs in cancer
Disease
H01403  Coffin-Siris syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    6659 (SOX4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    6659 (SOX4)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    6659 (SOX4)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 6659
NCBI-ProteinID: NP_003098
OMIM: 184430
HGNC: 11200
Ensembl: ENSG00000124766
UniProt: Q06945
Position
6:21593751..21598619
AA seq 474 aa
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG
GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE
QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG
GLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHRG
YASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLG
SFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggtgcagcaaaccaacaatgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctcgagctgggaatcgcctcctcccccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagctggtgcaagaccccgagtgggcacatcaag
cgacccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgagaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
tccagctcctcggccgccgcctcctccaagccgggggagaagggagacaaggtcggtggc
agtggcgggggcggccatgggggcggcggcggcggcgggagcagcaacgcggggggagga
ggcggcggtgcgagtggcggcggcgccaactccaaaccggcgcagaaaaagagctgcggc
tccaaagtggcgggcggcgcgggcggtggggttagcaaaccgcacgccaagctcatcctg
gcaggcggcggcggcggcgggaaagcagcggctgccgccgccgcctccttcgccgccgaa
caggcgggggccgccgccctgctgcccctgggcgccgccgccgaccaccactcgctgtac
aaggcgcggactcccagcgcctcggcctccgcctcctcggcagcctcggcctccgcagcg
ctcgcggccccgggcaagcacctggcggagaagaaggtgaagcgcgtctacctgttcggc
ggcctgggcacgtcgtcgtcgcccgtgggcggcgtgggcgcgggagccgaccccagcgac
cccctgggcctgtacgaggaggagggcgcgggctgctcgcccgacgcgcccagcctgagc
ggccgcagcagcgccgcctcgtcccccgccgccggccgctcgcccgccgaccaccgcggc
tacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcctcc
tcggcctcgtcccactcctcctcttcctcctcctcgggctcctcgtcctccgacgacgag
ttcgaagacgacctgctcgacctgaaccccagctcaaactttgagagcatgtccctgggc
agcttcagttcgtcgtcggcgctcgaccgggacctggattttaacttcgagcccggctcc
ggctcgcacttcgagttcccggactactgcacgcccgaggtgagcgagatgatctcggga
gactggctcgagtccagcatctccaacctggttttcacctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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