KEGG   Homo sapiens (human): 6660
Entry
6660              CDS       T01001                                 
Symbol
SOX5, L-SOX5, L-SOX5B, L-SOX5F, LAMSHF
Name
(RefSeq) SRY-box transcription factor 5
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
hsa  Homo sapiens (human)
Disease
H02156  Lamb-Shaffer syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    6660 (SOX5)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    6660 (SOX5)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 6660
NCBI-ProteinID: NP_008871
OMIM: 604975
HGNC: 11201
Ensembl: ENSG00000134532
UniProt: P35711
Position
12:complement(23529504..24562650)
AA seq 763 aa
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggcgagtccttgtctagtacagccctgggaactcctgaacggcgcaagggcagtttagct
gatgttgttgacaccttgaagcagaggaaaatggaagagctcatcaaaaacgagccggaa
gaaacccccagtattgaaaaactactctcaaaggactggaaagacaagcttcttgcaatg
ggatcggggaactttggcgaaataaaagggactcccgagagcttagctgagaaagaaagg
caactcatgggtatgatcaaccagctgaccagcctccgagagcagctgttggctgcccac
gatgagcagaagaaactagctgcctctcagattgagaaacagcgtcagcaaatggagctg
gccaagcagcaacaagaacaaattgcaagacagcagcagcagcttctacagcaacaacac
aaaatcaatttgctccagcaacagatccaggttcaaggtcagctgccgccattaatgatt
cccgtattccctcctgatcaacggacactggctgcagctgcccagcaaggattcctcctc
cctccaggcttcagctataaggctggatgtagtgacccttaccctgttcagctgatccca
actaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggagggaagctgccaggcata
ccccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcagcgttagctagtcct
tcagccagagttagcacaataggttacttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcaaatgaaggagcaactccgacgggaacaacaggtgcttgatgggaag
gtggctgttgtgaatagtctgggtctcaataactgccgaacagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccat
gcaatgatggatttcaatctgagtggagattctgatggaagtgctggagtctcagagtca
agaatttatagggaatcccgagggcgtggtagcaatgaaccccacataaagcgtccaatg
aatgccttcatggtgtgggctaaagatgaacggagaaagatccttcaagcctttcctgac
atgcacaactccaacatcagcaagatattgggatctcgctggaaagctatgacaaaccta
gagaaacagccatattatgaggagcaagcccgtctcagcaagcagcacctggagaagtac
cctgactataagtacaagcccaggccaaagcgcacctgcctggtggatggcaaaaagctg
cgcattggtgaatacaaggcaatcatgcgcaacaggcggcaggaaatgcggcagtacttc
aatgttgggcaacaagcacagatccccattgccactgctggtgttgtgtaccctggagcc
atcgccatggctgggatgccctcccctcacctgccctcggagcactcaagcgtgtctagc
agcccagagcctgggatgcctgttatccagagcacttacggtgtgaaaggagaggagcca
catatcaaagaagagatacaggccgaggacatcaatggagaaatttatgatgagtacgac
gaggaagaggatgatccagatgtagattatgggagtgacagtgaaaaccatattgcagga
caagccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (79)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (77)   
DNA sequence (131)   
   RefSeq(nuc) (77)   
   GenBank (27)   
   EMBL (27)   
Protein domain (2)   
   Pfam (2)   
All databases (233)   

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