KEGG   Homo sapiens (human): 6878
Entry
6878              CDS       T01001                                 
Symbol
TAF6, ALYUS, MGC:8964, TAF(II)70, TAF(II)80, TAF2E, TAFII-70, TAFII-80, TAFII70, TAFII80, TAFII85
Name
(RefSeq) TATA-box binding protein associated factor 6
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
Disease
H02694  Alazami-Yuan syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6878 (TAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    6878 (TAF6)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6878 (TAF6)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6878 (TAF6)
   Coactivators
    SAGA/TFTC/STAGA complex
     6878 (TAF6)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     6878 (TAF6)
    STAGA complex
     6878 (TAF6)
    TFTC complex
     6878 (TAF6)
    SAGA complex
     6878 (TAF6)
    SLIK complex
     6878 (TAF6)
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Bromo_TP TFIID-18kDa Histone
Other DBs
NCBI-GeneID: 6878
NCBI-ProteinID: NP_005632
OMIM: 602955
HGNC: 11540
Ensembl: ENSG00000106290
UniProt: P49848
Structure
Position
7:complement(100107070..100127171)
AA seq 677 aa
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP
GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT
PKANGSQPNSGSPQPAP
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggctgaggagaagaagctgaagcttagcaacactgtgctgccctcggagtccatgaag
gtggtggctgaatccatgggcatcgcccagattcaggaggagacctgccagctgctaacg
gatgaggtcagctaccgcatcaaagagatcgcacaggatgccttgaagttcatgcacatg
gggaagcggcagaagctcaccaccagtgacattgactacgccttgaagctaaagaatgtc
gagccactctatggcttccacgcccaggagttcattcctttccgcttcgcctctggtggg
ggccgggagctttacttctatgaggagaaggaggttgatctgagcgacatcatcaatacc
cctctgccccgggtgcccctggacgtctgcctcaaagctcattggctgagcatcgagggc
tgccagccagctatccccgagaacccgcccccagctcccaaagagcaacagaaggctgaa
gccacagaacccctgaagtcagccaagccaggccaggaggaagacggacccctgaagggc
aaaggtcaaggggccaccacagccgacggcaaagggaaagagaagaaggcgccgcccttg
ctggagggggcccccttgcgactgaagccccggagcatccacgagttgtctgtggagcag
cagctctactacaaggagatcaccgaggcctgcgtgggctcctgcgaggccaagagggcg
gaagccctgcaaagcattgccacggaccctggactgtatcagatgctgccacggttcagt
acctttatctcggagggggtccgtgtgaacgtggttcagaacaacctggccctactcatc
tacctgatgcgtatggtgaaagcgctgatggacaaccccacgctctatctagaaaaatac
gtccatgagctgattccagctgtgatgacctgcatcgtgagcagacagttgtgcctgcga
ccagatgtggacaatcactgggcactccgagactttgctgcccgcctggtggcccagatc
tgcaagcattttagcacaaccactaacaacatccagtcccggatcaccaagaccttcacc
aagagctgggtggacgagaagacgccctggacgactcgttatggctccatcgcaggcttg
gctgagctgggacacgatgttatcaagactctgattctgccccggctgcagcaggaaggg
gagcggatccgcagtgtgctggacggccctgtgctgagcaacattgaccggattggagca
gaccatgtgcagagcctcctgctgaaacactgtgctcctgttctggcaaagctgcgccca
ccgcctgacaatcaggacgcctatcgggcagaattcgggtcccttgggcccctcctctgc
tcccaggtggtcaaggctcgggcccaggctgctctgcaggctcagcaggtcaacaggacc
actctgaccatcacgcagccccggcccacgctgaccctctcgcaggccccacagcctggc
cctcgcacccctggcttgctgaaggttcctggctccatcgcacttcctgtccagacactg
gtgtctgcacgagcggctgccccaccacagccttcccctcctccaaccaagtttattgta
atgtcatcgtcctccagcgccccatccacccagcaggtcctgtccctcagcacctcggcc
cccggctcaggttccaccaccacttcgcccgtcaccaccaccgtccccagcgtgcagccc
atcgtcaagttggtctccaccgccaccaccgcaccccccagcactgctccctctggtcct
gggagtgtccagaagtacatcgtggtctcacttcccccaacaggggagggcaaaggaggc
cccacctcccatccttctccagttcctcccccggcatcgtccccgtccccactcagcggc
agtgccctttgtggggggaagcaggaggctggggacagtccccctccagctccagggact
ccaaaagccaatggctcccagcccaactccggctcccctcagcctgctccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (26)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (24)   
DNA sequence (57)   
   RefSeq(nuc) (27)   
   GenBank (15)   
   EMBL (15)   
3D Structure (32)   
   PDB (32)   
Protein domain (6)   
   Pfam (6)   
All databases (152)   

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