KEGG   Homo sapiens (human): 79008
Entry
79008             CDS       T01001                                 
Symbol
SLX1B, GIYD2
Name
(RefSeq) SLX1 homolog B, structure-specific endonuclease subunit
  KO
K15078  structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06506  Double-strand break repair
nt06508  Interstrand crosslink repair
  Element
N01448  Double Holliday junction resolution
N01465  Lesion bypass by TLS and DSB formation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    79008 (SLX1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    79008 (SLX1B)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     79008 (SLX1B)
SSDB
Motif
Pfam: SLX1_C GIY-YIG
Other DBs
NCBI-GeneID: 79008
NCBI-ProteinID: NP_076949
OMIM: 615823
HGNC: 28748
Ensembl: ENSG00000181625
UniProt: Q9BQ83
Position
16:29454533..29458220
AA seq 275 aa
MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR
GPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRA
PPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQAPAPRRRAGPFDDAEPEPDQG
DPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEK
SLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET
NT seq 828 nt   +upstreamnt  +downstreamnt
atgggtcccgcgggggtcgcggcgaggccagggcgctttttcggcgtctacctgctctac
tgcctgaacccccggtaccggggccgcgtctacgtggggttcactgtcaacactgctcgt
cgggtccagcagcacaatgggggccgcaaaaaaggcggggcctggcggaccagcgggcga
gggccctgggagatggtgctcgtcgtgcacggcttcccgtcctccgtggccgcccttcgg
tttgagtgggcttggcagcacccgcacgcctcgcgccgcctggcgcacgtggggcctcgc
ctgcgaggagagacagccttcgctttccacctgcgcgtgctggcgcacatgctgcgcgca
ccgccctgggctcgcctcccgctcacgctgcgctgggtgcgcccagacctccgccaggac
ctctgcctcccgccgccgccgcacgtgcctctggccttcgggcctccaccgccccaggcc
ccggccccaaggcgccgcgcaggtccctttgatgacgcggagcctgagccagaccagggg
gatccaggggcctgctgctccctgtgcgcccagaccatccaggatgaagaggggcccttg
tgttgcccccaccctggctgcctgctaagggcccatgtgatctgcctggcagaggagttt
cttcaggaagaaccagggcagcttctgcccctagagggccaatgcccttgctgtgagaag
tcactgctttggggagacctgatctggctgtgccagatggacactgagaaagaagtagaa
gactcagaattagaagaggcacactggacagacctgctggagacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Network (4)   
   KEGG NETWORK (4)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (11)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (22)   
   RefSeq(nuc) (4)   
   GenBank (9)   
   EMBL (9)   
Protein domain (2)   
   Pfam (2)   
All databases (69)   

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