KEGG   Homo sapiens (human): 83259
Entry
83259             CDS       T01001                                 
Symbol
PCDH11Y, PCDH-PC, PCDH22, PCDHX, PCDHY
Name
(RefSeq) protocadherin 11 Y-linked
  KO
K16498  protocadherin delta 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    83259 (PCDH11Y)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    83259 (PCDH11Y)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     83259 (PCDH11Y)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   83259 (PCDH11Y)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_3 DUF6377 FAM47 ROH1-like Drf_FH1 MAP17
Other DBs
NCBI-GeneID: 83259
NCBI-ProteinID: NP_116755
OMIM: 400022
HGNC: 15813
Ensembl: ENSG00000099715
UniProt: Q9BZA8 Q70LR4
Position
Y:5000296..5742228
AA seq 1340 aa
MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
PLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQECLIYG
HSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIAL
CHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIAL
HRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFA
PRQQARPSRGDSPIMETHPL
NT seq 4023 nt   +upstreamnt  +downstreamnt
atgtttagggttggcttcttaataatttcttcttcctcttctctctctcctcttcttttg
gtcagtgttgtgcgggttaatacaacaaactgtcacaagtgtttgttgtccgggacgtac
attttcgcggtcctgctagtatgcgtggtgttccactctggcgcccaggagaaaaactac
accatccgagaagaaattccagaaaacgtcctgataggcaacttgttgaaagaccttaac
ttgtcgctgattccaaacaagtccttgacaactactatgcagttcaagctagtgtacaag
accggagatgtgccactgattcgaattgaagaggatactggtgagatcttcactaccggc
gctcgcattgatcgtgagaaattatgtgctggtatcccaagggatgagcattgcttttat
gaagtggaggttgccattttgccggatgaaatatttagactggttaagatacgttttctg
atagaagatataaatgataatgcaccattgttcccagcaacagttatcaacatatcaatt
ccagagaactcggctataaactctaaatatactctcccagcggctgttgatcctgacgta
ggcataaacggagttcaaaactacgaactaattaagagtcaaaacatttttggcctcgat
gtcattgaaacaccagaaggagacaagatgccacaactgattgttcaaaaggagttagat
agggaagagaaggatacctatgtgatgaaagtaaaggttgaagatggtggctttcctcaa
agatccagtactgctattttgcaagtaagtgttactgatacaaatgacaaccacccagtc
tttaaggagacagagattgaagtcagtataccagaaaatgctcctgtaggcacttcagtg
acacagctccatgccacagatgctgacataggtgaaaatgccaagatccacttctctttc
agcaatctagtctccaacattgccaggagattatttcacctcaatgccaccactggactt
atcacaatcaaagaaccactggatagggaagaaacaccaaaccacaagttactggttttg
gcaagtgatggtggattgatgccagcaagagcaatggtgctggtaaatgttacagatgtc
aatgataatgtcccatccattgacataagatacatcgtcaatcctgtcaatgacacagtt
gttctttcagaaaatattccactcaacaccaaaattgctctcataactgtgacggataag
gatgcggaccataatggcagggtgacatgcttcacagatcatgaaattcctttcagatta
aggccagtattcagtaatcagttcctcctggagaatgcagcatatcttgactatgagtcc
acaaaagaatatgccattaaattactggctgcagatgctggcaaacctcctttgaatcag
tcagcaatgctcttcatcaaagtgaaagatgaaaatgacaatgctccagttttcacccag
tctttcgtaactgtttctattcctgagaataactctcctggcatccagttgatgaaagta
agtgcaacggatgcagacagtgggcctaatgctgagatcaattacctgctaggccctgat
gctccacctgaattcagcctggatcgtcgtacaggcatgctgactgtagtgaagaaacta
gatagagaaaaagaggataaatatttattcacaattctggcaaaagataatggggtacca
cccttaaccagcaatgtcacagtctttgtaagcattattgatcagaatgacaatagccca
gttttcactcacaatgaatacaaattctatgtcccagaaaaccttccaaggcatggtaca
gtaggactaatcactgtaactgatcctgattatggagacaattctgcagttacgctctcc
attttagatgagaatgatgacttcaccattgattcacaaactggtgtcatccgaccaaat
atttcatttgatagagaaaaacaagaatcttacactttctatgtaaaggctgaggatggt
ggtagagtatcacgttcttcaagtgccaaagtaaccataaatgtggttgatgtcaatgac
aacaaaccagttttcattgtccctccttacaactattcttatgaattggttctaccgtcc
actaatccaggcacagtggtctttcaggtaattgctgttgacaatgacactggcatgaat
gcagaggttcgttacagcattgtaggaggaaacacaagagatctgtttgcaatcgaccaa
gaaacaggcaacataacattgatggagaaatgtgatgttacagaccttggtttacacaga
gtgttggtcaaagctaatgacttaggacagcctgattctctcttcagtgttgtaattgtc
aatctgttcgtgaatgagtcagtgaccaatgctacactgattaatgaactggtgcgcaaa
agcattgaagcaccagtgaccccaaatactgagatagctgatgtatcctcaccaactagt
gactatgtcaagatcctggttgcagctgttgctggcaccataactgtcgttgtagttatt
ttcatcactgctgtagtaagatgtcgccaggcaccacaccttaaggctgctcagaaaaac
atgcagaattctgaatgggctaccccaaacccagaaaacaggcagatgataatgatgaag
aaaaagaaaaagaagaagaagcattcccctaagaacctgctgcttaatgttgtcactatt
gaagaaactaaggcagatgatgttgacagtgatggaaacagagtcacactagaccttcct
attgatctagaagagcaaacaatgggaaagtacaattgggtaactacacctactactttc
aagcctgacagccctgatttggcccgacactacaaatctgcctctccacagcctgccttc
caaattcagcctgaaactcccctgaatttgaagcaccacatcatccaagaactgcctctc
gataacacctttgtggcctgtgactctatctccaattgttcctcaagcagttcagatccc
tacagcgtttctgactgtggctatccagtgacaaccttcgaggtacctgtgtccgtacac
accagaccgtcccagcggcgtgtcacatttcacctgccagaaggctctcaggaaagcagc
agtgatggtggactgggagaccatgatgcaggcagccttaccagcacatcccatggcctg
ccccttggctatcctcaggaggagtactttgatcgtgctacacccagcaatcgcactgaa
ggggatggcaactccgatcctgaatctactttcatacctggactaaagaaagaaataact
gttcaaccaactgtggaagaggcctctgacaactgcactcaagaatgtctcatctatggc
cattctgatgcctgctggatgccggcatctctggatcattccagctcttcacaagcacag
gcctctgctctatgccacagcccaccactgtcacaggcctctactcagcaccacagccca
ccagtgacacagaccattgttctctgccacagccctccagtgacacagaccatcgcattg
tgccacagcccaccaccgatacaggtgtctgctctccaccacagtcctcctctagtgcag
ggtactgcacttcaccacagcccaccatcagcacaggcctcagccctctgctacagccct
cctttagcacaggctgctgcaatcagccacagctcttctctgccacaggttattgccctc
catcgtagtcaggcccaatcatcagtcagtttgcagcaaggttgggtgcaaggtgctaat
ggactatgctctgttgatcagggagtgcaaggtagtgcaacatctcagttttacaccatg
tctgaaagacttcatcccagtgatgattcaattaaagtcattcctttgacaaccttcgct
ccacgccaacaggccagaccgtccagaggtgattcccccattatggaaacacatcccttg
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (14)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (71)   
   RefSeq(nuc) (11)   
   GenBank (30)   
   EMBL (30)   
Protein domain (9)   
   Pfam (9)   
All databases (137)   

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