KEGG   Homo sapiens (human): 83443
Entry
83443             CDS       T01001                                 
Symbol
SF3B5, SF3b10, Ysf3
Name
(RefSeq) splicing factor 3b subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    83443 (SF3B5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    83443 (SF3B5)
Spliceosome [BR:hsa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    83443 (SF3B5)
 Complex B
    83443 (SF3B5)
 Complex C
   U2 SnRNP specific factors
    83443 (SF3B5)
SSDB
Motif
Pfam: SF3b10 DUF2264
Other DBs
NCBI-GeneID: 83443
NCBI-ProteinID: NP_112577
OMIM: 617847
HGNC: 21083
Ensembl: ENSG00000169976
UniProt: Q9BWJ5
Structure
Position
6:complement(144094884..144095573)
AA seq 86 aa
MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES
KARVRFNLMEKMLQPCGPPADKPEEN
NT seq 261 nt   +upstreamnt  +downstreamnt
atgactgaccgctacaccatccatagccagctggagcacctgcagtccaagtacatcggc
acgggccacgccgacaccaccaagtgggagtggctggtgaaccaacaccgcgactcgtac
tgctcctacatgggccacttcgaccttctcaactacttcgccattgcggagaatgagagc
aaagcgcgagtccgcttcaacttgatggaaaagatgcttcagccttgtggaccgccagcc
gacaagcccgaggagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
3D Structure (35)   
   PDB (35)   
Protein domain (2)   
   Pfam (2)   
All databases (73)   

Download RDF
DBGET integrated database retrieval system