KEGG   Homo sapiens (human): 84570
Entry
84570             CDS       T01001                                 
Symbol
COL25A1, AMY, CFEOM5, CLAC, CLAC-P, CLACP
Name
(RefSeq) collagen type XXV alpha 1 chain
  KO
K24356  collagen type XXV alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04974  Protein digestion and absorption
Disease
H00838  Congenital fibrosis of the extraocular muscles
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    84570 (COL25A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:hsa00536]
    84570 (COL25A1)
Glycosaminoglycan binding proteins [BR:hsa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   84570 (COL25A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 84570
NCBI-ProteinID: NP_942014
OMIM: 610004
HGNC: 18603
Ensembl: ENSG00000188517
UniProt: Q9BXS0
Position
4:complement(108808725..109302658)
AA seq 654 aa
MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ
ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL
KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgctgctgaagaagcacgcagggaaaggagggggccgggagcccagatccgaggacccg
acccctgccgaacagcattgtgcccggaccatgcccccgtgtgccgtcctggcggccctc
ctgtcagtggtggccgtggtgtcttgcctgtacctgggtgtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaaggggccccttccattcatctgctgcctgat
accctggatcacctcaagactatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagaatgtaactgc
ccagcaggccctccagggaaacgaggtaagagaggccgaagaggagaatctggtcctcct
ggacagcctggtcctcagggccctcctggtccaaaaggcgataagggagaacaaggtgat
cagggacctaggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggcagggcctccaggaccccct
ggccctccaggcccaagagggccacctggggacacagggaaagatggcccccgtggaatg
ccaggagtacccggtgaaccaggaaagccaggagaacaaggcttgatgggtcctctaggg
cctccgggacaaaagggttctattggagcacctggaattccagggatgaatgggcaaaag
ggtgagcccgggttgcctggagcagtaggacagaatggaataccaggacctaagggagaa
cctggagaacaaggtgaaaagggagacgctggagagaacggccccaagggtgacacaggc
gaaaagggtgaccctggatcatctgctgcaggaattaagggagaacctggggaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccaggtttaccaggaaca
aaaggtgaacggggggaagcagggcctcctggaagaggtgagcgaggggaacctggagcc
cccggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggg
gatcgtggagaaaaaggggactctggagctcagggaccaaggggtccacctggtcaaaaa
ggggatcaaggagccactgagatcatagactacaacggcaacctccacgaagccttacag
aggattaccaccttaactgtcacgggtccccctggacctcctggacctcaaggactacaa
gggccaaagggagagcagggatctccaggaatcccaggaatggatggagagcagggactc
aaaggctcaaagggagacatgggggacccaggtatgacaggtgaaaaaggaggaattgga
cttcctggattaccgggagccaatggaatgaaaggagaaaaaggagattctggaatgccg
ggtccacagggtccttctatcataggcccaccaggcccaccaggtccccatggcccacct
ggccccatgggacctcatggacttcctggaccaaagggtacagatggtcctatgggaccc
catggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctgga
ccaagagggccctatgggctgcctgggaaagatggagagcctggtcttgatggcttccct
ggtccacggggtgagaagggtgatctaggagaaaagggagaaaagggattccgtggcgtt
aagggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaa
ttggggccagatggcttacccatgcctggctgttggcaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (19)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (17)   
DNA sequence (28)   
   RefSeq(nuc) (18)   
   GenBank (5)   
   EMBL (5)   
Protein domain (1)   
   Pfam (1)   
All databases (71)   

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