KEGG   Homo sapiens (human): 85363
Entry
85363             CDS       T01001                                 
Symbol
TRIM5, RNF88, TRIM5alpha
Name
(RefSeq) tripartite motif containing 5
  KO
K10648  tripartite motif-containing protein 5 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
hsa05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    85363 (TRIM5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    85363 (TRIM5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    85363 (TRIM5)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     85363 (TRIM5)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    85363 (TRIM5)
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box zf-C3HC4_2 zf-RING_5 zf-RING_2 TMF_TATA_bd zf-C3HC4_3 FAM76 U-box zf-RING_4 Mis12 zf-RING_10 zf-Nse Baculo_IE-1
Other DBs
NCBI-GeneID: 85363
NCBI-ProteinID: NP_149023
OMIM: 608487
HGNC: 16276
Ensembl: ENSG00000132256
UniProt: Q9C035
Structure
Position
11:complement(5588635..5685074)
AA seq 493 aa
MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWVD
VTVAPNNISCAVISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSGKHY
WEVDVSKKTAWILGVCAGFQPDAMCNIEKNENYQPKYGYWVIGLEEGVKCSAFQDSSFHT
PSVPFIVPLSVIICPDRVGVFLDYEACTVSFFNITNHGFLIYKFSHCSFSQPVFPYLNPR
KCGVPMTLCSPSS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggcttctggaatcctggttaatgtaaaggaggaggtgacctgccccatctgcctggaa
ctcctgacacaacccctgagcctggactgcggccacagcttctgccaagcatgcctcact
gcaaaccacaagaagtccatgctagacaaaggagagagtagctgccctgtgtgccggatc
agttaccagcctgagaacatacggcctaatcggcatgtagccaacatagtggagaagctc
agggaggtcaagttgagcccagaggggcagaaagttgatcattgtgcacgccatggagag
aaacttctactcttctgtcaggaggacgggaaggtcatttgctggctttgtgagcggtct
caggagcaccgtggtcaccacacgttcctcacagaggaggttgcccgggagtaccaagtg
aagctccaggcagctctggagatgctgaggcagaagcagcaggaagctgaagagttagaa
gctgacatcagagaagagaaagcttcctggaagactcaaatacagtatgacaaaaccaac
gtcttggcagattttgagcaactgagagacatcctggactgggaggagagcaatgagctg
caaaacctggagaaggaggaggaagacattctgaaaagccttacgaactctgaaactgag
atggtgcagcagacccagtccctgagagagctcatctcagatctggagcatcggctgcag
gggtcagtgatggagctgcttcagggtgtggatggcgtcataaaaaggacggagaacgtg
accttgaagaagccagaaacttttccaaaaaatcaaaggagagtgtttcgagctcctgat
ctgaaaggaatgctagaagtgtttagagagctgacagatgtccgacgctactgggttgat
gtgacagtggctccaaacaacatttcatgtgctgtcatttctgaagataagagacaagtg
agctctccgaaaccacagataatatatggggcacgagggacaagataccagacatttgtg
aatttcaattattgtactggcatcctgggctctcaaagtatcacatcagggaaacattac
tgggaggtagacgtgtccaagaaaactgcttggatcctgggggtatgtgctggcttccaa
cctgatgcaatgtgtaatattgaaaaaaatgaaaattatcaacctaaatacggctactgg
gttatagggttagaggaaggagttaaatgtagtgctttccaggatagttccttccatact
ccttctgttcctttcattgtgcccctctctgtgattatttgtcctgatcgtgttggagtt
ttcctagactatgaggcttgcactgtctcattcttcaatatcacaaaccatggatttctc
atctataagttttctcactgttctttttctcagcctgtatttccatatttaaatcctaga
aaatgtggagtccccatgactctgtgctcaccaagctcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (23)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (21)   
DNA sequence (70)   
   RefSeq(nuc) (34)   
   GenBank (18)   
   EMBL (18)   
3D Structure (2)   
   PDB (2)   
Protein domain (17)   
   Pfam (17)   
All databases (143)   

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