KEGG   Homo sapiens (human): 9392
Entry
9392              CDS       T01001                                 
Symbol
TGFBRAP1, TRAP-1, TRAP1, VPS3
Name
(RefSeq) transforming growth factor beta receptor associated protein 1
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    9392 (TGFBRAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    9392 (TGFBRAP1)
Membrane trafficking [BR:hsa04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    9392 (TGFBRAP1)
SSDB
Motif
Pfam: Vps39_2 Vps39_1 Clathrin CNH
Other DBs
NCBI-GeneID: 9392
NCBI-ProteinID: NP_001136093
OMIM: 606237
HGNC: 16836
Ensembl: ENSG00000135966
UniProt: Q8WUH2
Position
2:complement(105249404..105329735)
AA seq 860 aa
MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP
ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA
TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL
CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE
LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID
KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL
QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL
AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA
RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH
THCAASRHTNPSSSSPGTRT
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgatgagcatcaaagcctttacgcttgtctctgctgtggagcgggagctgctgatgggc
gacaaggagcgcgtcaacatagagtgcgtggagtgctgcggcagggacctctacgtgggc
accaacgactgcttcgtctaccacttcctgttggaggagaggccagtgcctgctgggcca
gccacgttcactgccaccaaacagctgcagagacacttgggcttcaagaagcccgtgaac
gagctgcgtgcggcctcagcactcaacaggctgctggtgctgtgtgacaactccatcagc
ctggtcaacatgctgaacctcgagccagtgccttcgggggcccgcatcaagggggcagcc
acgtttgcactgaacgagaaccctgtgagtggggaccccttctgtgtagaagtttgcatc
atctctgtcaaacgcagaaccatccagatgtttctggtgtacgaggaccgggtgcagatc
gtcaaggaggtgtcgactgccgagcagcccctcgctgtggctgtggacggccacttcctg
tgtctggctctgaccactcagtacatcatccacaattacagcacaggcgtctcccaggac
ctgtttccctactgcagtgaggagaggccgccgatcgtcaagaggatagggagacaggag
ttcctgctggcgggccccggagggctgggcatgtttgccacagtcgcagggatatcccag
cgcgcccccgtgcactggtcggagaatgtgattggggcggctgtgtcctttccatacgtc
atagcgctcgatgacgaattcatcacagtccacagcatgttggatcagcaacagaagcag
acgctgccctttaaggagggccatatcctacaggactttgaaggaagagtgatcgttgcc
acaagtaaaggagtttacatcttggttccattacctttggaaaaacaaatacaggatctt
ctagcaagccgcagagtagaagaggctttggttttagcaaaaggagcccggaggaacatt
ccaaaggaaaaatttcaggtaatgtacagaaggattctgcagcaggcgggatttatacag
tttgcacaacttcagttcctggaagctaaagagctcttcagaagcggccagcttgatgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcctccttcacccggtcc
caccctcctcttcatgagtacgcagacctgaaccagctgacccagggggaccaggagaag
atggccaagtgcaaacgcttcctcatgagctacctgaacgaggtccgcagcacagaggta
gcaaatggctacaaggaggacatcgacacagccttgctcaaactgtatgcagaggctgac
cacgacagcctgctggacctcctggtcactgagaacttctgtcttctgacggacagtgct
gcctggctagagaagcacaaaaagtattttgcacttggactgctctatcattataataac
caagatgctgctgcagttcagttgtgggtgaacattgtgaatggcgatgtccaggactcc
acacgctcagacctgtatgaatacatcgtggattttcttacctactgcttagacgaggaa
ctagtgtgggcctatgctgattgggtcctgcagaaaagtgaagaggtcggagttcaggtt
ttcaccaagagacctttggatgaacagcagaagaacagttttaatccagacgacattatc
aattgccttaaaaaataccctaaagcccttgtgaagtatctggaacatcttgtgatagac
aagagactgcagaaagaagagtatcacacccacttagctgtgctgtacctggaagaggtg
ctgctgcagagggcctccgccagtggcaagggtgcagaggccaccgagacgcaggccaag
ctgcggcggctgctccagaaatctgatttataccgagtccactttcttctcgagaggctg
cagggagctggcctgcccatggagagcgccatcctgcacgggaagctgggcgagcatgag
aaggcgctgcatatcctggtgcacgagctgcaggactttgcagcggccgaggactactgc
ctgtggtgctccgagggccgagacccaccccaccgccagcaactctttcacacgctgctg
gccatctacctgcatgctggccccactgcccacgagctggccgtggctgccgtggacctg
ctgaaccgccacgccaccgaatttgatgcagcccaggtgctgcagatgctgcctgacacc
tggtcagtgcagctcctctgcccattcctgatgggggccatgagggacagcatccatgcc
aggaggaccatgcaggtggctctcggcctggccaggtccgaaaacttaatctacacctac
gataagatgaagttgaaaggaagctcaatccaactctcagacaaaaagctttgtcagata
tgccaaaatcccttttgtgagcctgtgtttgttagatacccaaatggtggtcttgtgcac
acccactgtgccgccagcagacacacaaaccccagctcatccagtcctggcactcggact
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (27)   
   RefSeq(nuc) (9)   
   GenBank (9)   
   EMBL (9)   
Protein domain (4)   
   Pfam (4)   
All databases (64)   

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