KEGG   Homo sapiens (human): 9646
Entry
9646              CDS       T01001                                 
Symbol
CTR9, SH2BP1, TSBP, p150, p150TSP
Name
(RefSeq) CTR9 homolog, Paf1/RNA polymerase II complex component
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    9646 (CTR9)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     9646 (CTR9)
SSDB
Motif
Pfam: TPR_1 TPR_19 TPR_2 TPR_14 TPR_8 TPR_16 TPR_12 TPR_17 TPR_10 TPR_6 TPR_11 TPR_7 TPR_9 TPPII_C ANAPC3
Other DBs
NCBI-GeneID: 9646
NCBI-ProteinID: NP_055448
OMIM: 609366
HGNC: 16850
Ensembl: ENSG00000198730
UniProt: Q6PD62
Structure
Position
11:10751246..10779746
AA seq 1173 aa
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEDEEGGERKKKKR
RRHPKGEEGSDDDETENGPKPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSNSDSDEDEQRKKCASSESDSDENQNKSGSEAGSPRRPRRQR
SDQDSDSDQPSRKRRPSGSEQSDNESVQSGRSHSGVSENDSRPASPSAESDHESERGSDN
EGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgtcgcggggctccatcgagattcccctccgggacactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaaacaggaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaaggaaaaacagaagagttt
gtaaaattgttggaagcagcacgtatagatggcaatttggactatagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcgtattatgtacaacaggctcggaaagaa
aagaataaggacaataaaaaggatcttattacacaggccaccttgttgtatacaatggcc
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctactt
gagggtgacaaaatggatcaagctgatgcacagtttcattttgtactcaatcagtctcca
aataatattccagcccttcttggtaaagcttgcatttccttcaacaagaaggattacaga
ggagctcttgcttactataagaaagcattgcgtactaacccaggatgtccagcggaagtt
cgtttaggaatgggtcattgctttgtgaaacttaacaaactggaaaaagctcgtctggca
ttcagcagagccctggaactcaattccaaatgcgtgggagcattggttggactggctgtt
ctagaactcaacaataaagaggctgattccattaaaaatggtgtccagcttctttccaga
gcctatactattgatcctagcaaccctatggtattgaaccatttggcaaatcactttttc
ttcaaaaaggattatagtaaagtccagcatctggccctccatgcattccataatacagaa
gtggaagctatgcaagcagagagctgctatcagctagctagatcattccatgttcaggaa
gattatgaccaagcttttcagtactattatcaagccacacagtttgcctcatcctctttt
gtgctcccattttttggtttgggacaaatgtatatttatcgaggtgacaaagaaaatgca
tctcagtgctttgagaaggttttgaaagcttatcctaataattacgaaactatgaaaatt
ctcggctctctctatgctgcctcagaagatcaagaaaaacgagatattgccaagggccat
ttgaagaaggtcacagaacagtatcccgatgatgttgaagcttggattgaattggcacaa
atcttagaacagactgatatacagggtgccctttcagcctatggaacagcaacacgaatc
cttcaggagaaagtgcaggccgatgttcctccagagattctcaataatgtgggtgccctc
cattttagacttggaaacctaggggaggctaagaaatattttttggcgtcattggaccgt
gcaaaagcagaagcggaacacgatgagcattactataacgccatttccgttaccacgtca
tataatctcgccaggctatatgaggcgatgtgtgaattccatgaagcagaaaaactgtat
aaaaacatcttacgcgaacatcctaattatgttgactgctatttgcgcctaggagccatg
gctagagataagggaaacttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggatcatccagatgcttggtctttgattggcaatcttcatttggcaaaacaagaa
tggggtcctgggcagaagaagtttgagaggatattaaaacagccatccacacagagtgat
acctattctatgctagcccttggcaacgtgtggctccaaactttacatcagcccacccga
gatcgagaaaaggaaaagcgtcatcaagatcgtgctctggccatctacaaacaagtactc
agaaatgatgcaaagaatctgtatgctgccaatggcataggagctgttttggcccacaaa
ggatattttcgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatt
agtgatgtgtggctgaacttagcacacatctatgtggagcaaaagcagtacatcagcgcc
gttcagatgtatgaaaactgcctccgaaagttctataagcaccaaaacactgaagttgta
ctctatttggcccgggccctcttcaagtgtggcaagttacaggaatgcaaacagactttg
ctgaaggctagacatgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatctgaaggaagtactt
aatgctgtgaaagaactggagcttgcacatagatacttcagttatttgagtaaagtggga
gataaaatgagatttgatttggcccttgctgctacagaagccaggcagtgttctgactta
ctgagccaggcccagtaccatgtggcccgggcacgcaaacaagatgaagaagagcgggag
ctgcgggccaagcaagagcaagaaaaggagctgttaaggcagaaacttcttaaagaacag
gaagagaaacgtctcagagaaaaggaagagcaaaagaaacttttggaacagcgggcccag
tatgtggagaagaccaaaaatattcttatgtttactggtgagactgaagcaacaaaagag
aagaaaagaggtggtggtggtggacggcgttctaagaagggaggagagtttgatgaattt
gtcaatgatgacactgatgatgacctacctatatccaaaaagaagaagagaagaaagggt
agtggcagtgaacaagaaggtgaagatgaggagggtggtgagagaaagaagaaaaagagg
agaagacatccaaagggagaagaaggatctgatgatgatgaaacagaaaatggccccaaa
ccaaaaaaacgacgtccaccaaaagcagagaagaaaaaggctcccaagccagaacgtctg
cctccatcaatgaagggaaaaataaaatccaaagccataatttcatcaagtgatgactct
tcggatgaggataaacttaaaattgctgatgaaggacatcccaggaacagcaacagcaac
agtgactcagacgaggacgaacaacgaaagaaatgtgcctcatcagagagtgattccgat
gagaaccagaacaagtctggcagcgaggccggcagtccccggaggccacgaagacagcgg
tcagatcaggactcagacagtgaccagccatccagaaagagaaggccctccggttctgag
cagtctgacaatgaatctgtgcagtcagggagaagccactcaggagtttctgagaacgac
tctcgcccagcttctccaagtgccgaatcagatcacgaatcggagagaggatctgataat
gagggttctggccaaggctctggaaatgaatcggaaccagagggatccaacaatgaggcc
tcagatagaggctcagaacatgggtcagatgatagtgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
3D Structure (8)   
   PDB (8)   
Protein domain (15)   
   Pfam (15)   
All databases (70)   

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