KEGG   Lactobacillus acidophilus NCFM: LBA1549
Entry
LBA1549           CDS       T00231                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lac  Lactobacillus acidophilus NCFM
Pathway
lac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LBA1549 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lac03400]
    LBA1549 (mutM)
Enzymes [BR:lac01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LBA1549 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LBA1549 (mutM)
DNA repair and recombination proteins [BR:lac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LBA1549 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn-ribbon_8 Zn_Tnp_IS1595 Auto_anti-p27 NFACT_N zinc-ribbons_6 OrfB_Zn_ribbon zf-TFIIB
Other DBs
NCBI-ProteinID: AAV43366
UniProt: Q5FIV8
Position
complement(1537335..1538165)
AA seq 276 aa
MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPTIVATDHDEFLKELPGKKIIGIDRYAKYL
LIRLSDNLTIVSHLRMEGKYHLTTEDAPKDKHDHVEFVFTDKTALRYNDVRKFGRMQLII
TGTERQVTGIKKLGPEPNTSEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGLGNIYVDETL
WQSKIHPLSIANKIPAKKVAGLWENINQTIALAIEKRGTTVHSYLDANGEVGGYQEMLQV
YGHVGEECPRCGNIFEKIKVSGRGTTFCPHCQVIYK
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcccgagatgcctgaagttgagacagttcgtagaacattattgcctttaattaaaggc
aagacgattgaaaaggtagttttatggtatccaacgattgtggctacagatcatgatgaa
tttttgaaggaattacctggtaaaaaaatcattggaattgatcgttacgccaaatatttg
cttattcgattaagcgataatttgacgattgtatcgcatttgcgcatggaggggaaatat
catctaactactgaagatgcgccaaaagataagcatgatcatgtagagtttgtttttaca
gataagactgcattgcggtataatgacgttcgtaaatttgggcgaatgcagttaatcatt
actggcactgaacgtcaagtgacagggataaagaaattagggcccgaacctaatacgtct
gagtttagtcaacaatatttaatcgataatctaaaaaagaaacataaaaatatcaaaaac
gttttactcgatcaaactacggtggcaggattaggtaatatttatgtcgatgaaacttta
tggcaaagtaaaattcatccattaagtattgctaataagattcctgctaaaaaagtagct
ggtttatgggaaaacattaatcaaacaattgcgctagcaatcgaaaaacgggggacaact
gtccatagttatctagatgctaatggagaagttggtggttatcaagaaatgctacaagtg
tatgggcatgtaggcgaagagtgtccacgttgtggcaatatttttgaaaagattaaagtg
tcgggaagaggaacaacattttgtcctcattgtcaggtgatttataaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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