KEGG   Mus musculus (house mouse): 101943
Entry
101943            CDS       T01002                                 
Symbol
Sf3b3, 1810061H24Rik, 5730409A01Rik, D8Ertd633e, RSE1, SAP130, SF3b130, mKIAA0017
Name
(RefSeq) splicing factor 3b, subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101943 (Sf3b3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    101943 (Sf3b3)
   03041 Spliceosome [BR:mmu03041]
    101943 (Sf3b3)
   03036 Chromosome and associated proteins [BR:mmu03036]
    101943 (Sf3b3)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     101943 (Sf3b3)
Spliceosome [BR:mmu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101943 (Sf3b3)
 Complex B
    101943 (Sf3b3)
 Complex C
   U2 SnRNP specific factors
    101943 (Sf3b3)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     101943 (Sf3b3)
    TFTC complex
     101943 (Sf3b3)
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 101943
NCBI-ProteinID: NP_598714
MGI: 1289341
Ensembl: ENSMUSG00000033732
UniProt: Q921M3 B2RSV4
Structure
Position
8:complement(111537123..111573578)
AA seq 1217 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctgtacaacctgaccttacagcgggccactggcatcagctttgccatccatggc
aacttctctggaaccaagcaacaggaaattgttgtttcccgtgggaagattttggagtta
ctacgcccagaccctaacactggcaaagtacataccctcctcactgttgaagtatttggt
gttatccggtcacttatggcgtttaggctaacaggtggcaccaaagactacattgtagtt
ggcagtgactcaggccggattgttatcttggaataccagccatcaaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagcggatgtcgccgtattgttcctggccagttc
ttagctgtggatcccaaaggaagagctgttatgattagtgcaattgagaagcagaaattg
gtatatatcttgaacagagacgctgcagcccgacttaccatttcctctcccctggaggcc
cacaaagcgaacactctggtgtatcacgtggttggcgtagacgtgggatttgagaatcct
atgtttgcttgtctggaaatggattatgaggaggcagacaatgatccaacaggggaagca
gcagccaatacccagcagacacttactttctatgaactggaccttggcttaaatcatgtg
gttcggaaatacagtgaacccttggaggaacatggcaacttccttattacagttcctgga
gggtcagatggtccaagtggagtgctaatctgctctgagaattatatcacctacaagaac
tttggtgaccagccagacatccgatgtccaattcccaggagacggaatgacctggatgac
cctgaacgaggaatgatttttgtttgctctgccacccataagaccaagtccatgttcttc
tttctggcccaaacggagcagggagatatctttaagatcactttagagacagatgaagat
atggtaaccgagatccgcctcaagtattttgatactgtgcctgttgctgctgctatgtgt
gtgcttaaaacaggcttcctttttgtggcgtcagaatttggaaatcattacttgtatcaa
attgcccatctcggagatgatgatgaagaacctgagttttcgtctgccatgcctctagaa
gaaggagacacattcttctttcagccgagaccactcaaaaatctcgtgctggtggatgaa
ctggacagcctctctcctattctgttttgccagatagctgatttggccaatgaagacacc
ccacagctgtatgtagcctgtggtaggggaccccggtcctccctgagagtcttaaggcat
ggacttgaggtgtcggaaatggctgtttctgagctccctggtaaccccaatgctgtctgg
acagtccgtcggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgctatctatcggagagactgtggaagaagtgactgactctggcttcttg
ggcaccactccaaccttgtcctgctccttgttaggagatgatgcactggtgcaggtgtat
ccagatggcatccgacacatacgagcagataaaagagttaatgagtggaagactcccggc
aagaaaacgattgtgaagtgtgcagtgaaccagcgacaagtggtgatcgccctgactggg
ggagagctggtctatttcgagatggatccttcaggacagttgaatgagtacacggagcgg
aaagagatgtcagcagatgtggtgtgcatgagtctggccaacgtgccccctggagaacag
cgatctcggttcctggctgtggggctggtggacaacactgtcagaatcatctccctcgac
ccatcagactgtttacagcctctgagtatgcaggctctcccagcccagcctgagtctcta
tgtattgtggaaatgggtgggactgagaaacaagatgagctgggtgagagaggctctatt
ggcttcctgtacctgaacattggactacagaacggtgtactgctgaggactgtcctagac
cctgttactggggacctgtctgacacccgcactaggtatctggggtcccgtcctgtgaaa
ctcttccgggtccggatgcaaggccaggaggctgttctggctatgtccagtcgctcatgg
ctgagctactcttaccagtctcgcttccatctcacccctctgtcttatgagaccctggaa
tttgcatcgggctttgcctctgaacagtgtcccgagggcattgttgccatctccaccaac
actttgaggattttggctttagagaagcttggtgctgtcttcaatcaagtagccttccca
ttgcagtacacacccaggaagtttgtcatccaccctgagagtaacaaccttatcatcatt
gagacggatcacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggct
gaggaaatggtagaagcagcaggggaggatgagcgggagttggctgcagaaatggcagca
gcattcctcaatgaaaacctcccagaatccatttttggagctcccaaggctggcaatggg
cagtgggcctctgtgattcgggtgatgaaccctatccaggggaatacactagaccttgtc
cagttggagcaaaacgaggcagcctttagtgtggcagtgtgtaggttctccaacactggt
gaagattggtatgtgctggtgggtgttgccaaggacttgatactgagccctcgatctgtg
gcagggggctttgtgtatacgtacaagcttgtgaacaacggggagaagttggagtttctg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtactg
attggtgtcgggaagcttttacgagtttatgacctggggaagaagaagttacttcgaaag
tgtgagaataagcatattgccaattacatatctgggatccagacaattggtcacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatacaagcgtaacgagaaccag
ctcattatctttgctgatgacacctatcccagatgggtcaccacagccagccttctcgac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaacgatgaggtggatgaagatcccactggaaacaaagccctgtgggaccggggc
ttgctcaatggggcttcacagaaggcagaggtcatcatgaactaccacgttggagagacc
gtgctgtcgctacagaagaccacactgatccctggaggctcagagtcccttgtctatacc
actttatctggaggaattggcatccttgtccctttcacgtctcacgaggaccatgacttc
ttccagcatgttgaaatgcacctgcggtctgagcatccccctctttgtggacgggaccac
ctgagctttcgttcttactatttccctgttaagaatgtgattgatggagacctttgtgag
cagttcaactccatggaacccaacaagcagaagaacgtctctgaggagctggaccgaacc
ccacctgaagtgtccaagaagcttgaggacattaggacccgctatgccttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (63)   
   RefSeq(nuc) (3)   
   GenBank (30)   
   EMBL (30)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (118)   

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