KEGG   Mus musculus (house mouse): 103135
Entry
103135            CDS       T01002                                 
Symbol
Pan2, 1200014O24Rik, Usp52, mKIAA0710
Name
(RefSeq) PAN2 poly(A) specific ribonuclease subunit
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103135 (Pan2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    103135 (Pan2)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     103135 (Pan2)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103135 (Pan2)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     103135 (Pan2)
SSDB
Motif
Pfam: PAN2_N UCH_1 RNase_T UCH WD40_like
Other DBs
NCBI-GeneID: 103135
NCBI-ProteinID: NP_598753
MGI: 1918984
Ensembl: ENSMUSG00000005682
UniProt: Q8BGF7
Position
10:128135106..128157227
AA seq 1200 aa
MNFEGLDPGLAEFSPAMHSTLDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGGDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSVLLTDNSTLLVGGLQNHVLE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRSFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDALLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDHEFDNFSQVTESPTGREE
EPLHTVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPV
RCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSD
EASGKGSLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSFCSSGDSIIGQLFSCEME
NCSLCRCGSETVRASSTLLFTLSYPEDKTGKNYDFAQVLKRSICLEQNTQAWCDNCEKYQ
PTIQTRNIRHLPDILVINCEVNSSKEADFWRLQAEVAFKIAVKKYGGEMKSKEFALADRK
ELRSPEGFLCSSIEELKNVWLPFSIRMKMTKNKGLDVCNWADEHELSSLGAPSQWGPARA
EEELGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPI
DKYEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFI
PLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEG
IPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVG
HGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDAR
TALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPESQTSPKNAAVFSVLAL
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgaactttgagggtctggatcctggactggccgaattttccccagctatgcattctacc
ctggacccagtcctggatgcccacctgaatccaagtttgctacagaatgtggagctagac
ccagagggagtggccttggaggctcttcctgtccaggagtcagtgcacataatggaaggt
gtctactctgagttgcacagcgtggtggctgaagtgggagtgcctgtgtctgtctcccac
tttgatttacatgaggagatgctgtgggtggggagccatgggggccatgccacctccttc
ttcggcccagctctggagcgctactcatcctttcaggtcaatggtggtgacgacattcgg
caaatccagagcctggagaacggtatcctcttcctcaccaagaacaacctcaagtacatg
gcccgtggagggctcattatatttgactatttgctggatgaaaacgaggatatgcacagc
gtcctcctgacagacaacagcactctgctcgttggggggctgcagaaccacgtactggag
attgacctgaacactgtccaggagactcagaagtatgcagtcgagacacccggagtcacc
atcatgagacagacaaatcgtttcttcttctgtggccacacatctggcaaggtttccctg
cgagacctccgtagttttaaagtggagcatgaatttgatgccttctcagggagtctgtca
gattttgatgttcatggcaacctgctggctgcctgcggcttctccagtcgccttaccggc
ctggcctgtgaccgtttcctcaaagtgtacgatctgcgcatgatgcgtgccatcacacct
cttcaagtgcacgtggatccggccttcttacgattcatccccacatacacttcccgcctt
gctatcatctcccagtcaggtcaatgccagttttgtgaacccacaggcctggccaaccca
gccgacattttccatgtgaatcccgtgggacctttgctaatgacgtttgatgtgtcagcc
agcaagcaggccctggcctttggggattctgagggctgcgtgcatctctggactgattcc
cctgagccgtccttcaacccctactcccgagagactgagtttgccctgccctgtcttgtg
gactccttgccgcctctggactggagccaggatctgctgccgctttccctcattcccgtc
ccacttaccactgatgcactgctctctgactggcctgctgccaactctgctcccgctccc
aggcgagcaccacctgtggatgcagaaattcttcgaaccatgaagaaagtgggcttcatt
ggctatgctcccaaccctcgcaccaggctgcgcaaccagattccctatcgactaaaggag
tcagaccatgaatttgacaacttcagccaagtcacggagtcaccgacagggcgagaagag
gagcctctccacacagtttctaagaaataccggaaggtaaccatcaaatattccaagcta
ggcctggaagactttgacttcaaacactacaataagactctgtttgctgggttagagcct
cacatccccaatgcctactgtaactgcatgatccaggtgctctatttcttggagcctgtt
cgctgtctgatccagaaccacctttgccaaaaggagttctgcctagcgtgcgagctcggc
ttcctcttccacatgctagacctctctcgtggcgatccttgtcagggcagtaatttcctc
cgagctttccggaccatccctgaggcctcagctctgggtctcatccttgctgactcagat
gaggcttcaggcaagggcagtctggcccggctcatccagaggtggaaccgcttcatcctc
actcagctacatcaggatatgcaggagctggaagtgccccaggcttatcgaggtgctgga
ggcagtttctgctcatcaggagactccatcattgggcagctgttcagttgtgagatggag
aactgcagtctttgccgctgcggcagcgagactgtgcgggcctcgtccaccctactcttc
acactctcctaccctgaggataaaaccgggaagaactatgactttgctcaggtgctgaag
cgaagtatctgcctggagcagaacacacaggcctggtgtgacaactgtgagaagtaccag
cccacaattcagaccagaaacatccgacatctgccagatattcttgtcattaactgtgaa
gtgaatagctcaaaagaggctgatttctggagactgcaagctgaggttgccttcaaaata
gcggtgaaaaagtacggcggggaaatgaagagcaaagagtttgctttagctgatcggaag
gaactgaggagtccagagggctttctgtgttcctccatcgaggagctgaagaatgtctgg
cttccattttccatccgcatgaagatgaccaagaacaaaggactggatgtttgcaactgg
gctgacgagcatgagcttagcagcctgggtgccccctcacagtggggtccggccagggca
gaggaggagcttggtgtctatgtatatgacctgatggctactgtggtacacatcctggac
tcacgaacaggcggcagcttggtggctcacatcaaagtcggtgagacctaccaccagcgc
aaggagggcgtgactcatcagcagtggtatctcttcaatgacttccttattgaacctatt
gataagtatgaagccgtgcagtttgacatgaattggaaagtacctgctatcctgtattat
gtcaaaaggaatctcaattccagatacaatctgaatatcaagaaccccattgaggccagt
gtgctgctggcagaagcctcgctggcacggaagcaacggaaaacacacacgacctttatt
ccattgatgctgaatgagatgccacaggtcggggacctggtgggcctggatgccgagttt
gtcactcttaatgaggaagaagcagagttacgcagtgatggtaccaagtccaccattaag
ccaagccagatgtcagtagcaaggatcacctgtgttcggggccaagggcctaacgagggc
atccccttcattgatgactacatctccacgcaggagcaggtagtagattacttgactcag
tactcggggataaagccaggagaccttgatgccaaaatctcctcaaagcacctcacaacc
ctcaagtctacctacttaaagcttcgctttctcattgatattggagtcaagtttgtgggt
catggtctgcagaaggacttccgggtcatcaacctcatggtgcccaaggaccaagttctt
gacacagtctacctgttccacatgccccgaaaacgaatgatttccctacgattcctggcc
tggtattttctagacctgaagattcaaggtgagacccatgacagcattgaggatgcccgc
acagcccttcaactctaccggaagtatctggagctgagcaagaacggcaccgagcccgag
tccttccacaaggtgctcaagggtctctatgagaagggccgaaagatggactggaaggtg
cctgagcctgaaagccagacaagtcccaagaatgcagctgtcttctcagtgctggcactg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (17)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (66)   
   RefSeq(nuc) (24)   
   GenBank (21)   
   EMBL (21)   
Protein domain (5)   
   Pfam (5)   
All databases (111)   

Download RDF
DBGET integrated database retrieval system