KEGG   Mus musculus (house mouse): 103963
Entry
103963            CDS       T01002                                 
Symbol
Rpn1, D6Wsu137e, Rpn-1
Name
(RefSeq) ribophorin I
  KO
K12666  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu00510  N-Glycan biosynthesis
mmu00513  Various types of N-glycan biosynthesis
mmu01100  Metabolic pathways
mmu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    103963 (Rpn1)
   00513 Various types of N-glycan biosynthesis
    103963 (Rpn1)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103963 (Rpn1)
SSDB
Motif
Pfam: Ribophorin_I DNA_repr_REX1B FliD_C MTR4_beta-barrel CtIP_N
Other DBs
NCBI-GeneID: 103963
NCBI-ProteinID: NP_598694
MGI: 98084
Ensembl: ENSMUSG00000030062
UniProt: Q91YQ5 Q5RKP4 Q8BMR3
Position
6:88061455..88082286
AA seq 608 aa
MESPVALLLLLLLCLGALAPTPGSASSEAPPLVNEDVKRTVDLSSHLAKVTAEVVLVHPG
GGSTSRASSFVLALEPELESRLAHLGVQIKGEDEEDNNLEVRETKIKGKSGRFFTVKLPV
ALDPGSKISVVVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVKLAS
RNVESYTKLGNPSRSEDVLDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHW
GNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGN
VSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHV
FDEQVIDSLTVKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQ
HIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACIT
EQVLTLVNKRLGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKAVTSEIAVLQSRLKT
EGSDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYLENEKLSSGKRQELVTK
IDHILDAL
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggagtcgccggtcgccttgctgttgctgctgctgctatgtctcggggccttggccccg
acgcccggcagcgcctcctcggaggctccgccgctggtcaacgaggacgtgaagcgcacg
gtggacctgagcagccacctagccaaggtgacggctgaggtggtcctggtacacccgggc
ggcggctccacatcacgagccagctctttcgttctggccctggagccagaactggagtcg
cggcttgcgcacctaggcgtgcagataaagggagaagatgaggaagacaacaacctagaa
gtacgagaaaccaaaattaaagggaaaagtgggagatttttcacggtcaagctcccagtt
gctcttgatcctgggtccaagatctcggtcgttgtggaaactgtctacacccatgtgctt
catccgtatccgactcagataactcagtcagagaaacagttcgtcgtgtttgagggcaac
cattatttctactctccctatccaacaaagacccagaccatgcgagtgaaactggcgtcc
cgaaatgtggaaagctataccaagctggggaacccctcgagatctgaggacgtccttgat
tatgggccttttaaagacatccctgcctacagtcaggacactttcaaagtacattacgag
aacaatagccctttcctgaccatcaccagtatgacccgggtcatcgaggtatctcactgg
ggcaatattgctgtggaagagaacgtggacttgaagcacacgggcgcagtgctgaagggg
cctttctcccgctacgattaccagaggcagcctgacagtgggatctcctccattcgttct
tttaagaccatccttcctgctgccgcccaggatgtctattaccgggatgagattggtaat
gtttccaccagccacctccttatcttggatgactctgtggaaatggaaatccggcctcga
tttcctctctttggagggtggaagacacactacatcgttggttacaacctcccaagctat
gaatacctctataatctgggtgaccagtatgcactgaagatgcggtttgtagaccacgtg
tttgatgagcaagtgatagattctctgacagtgaagatcatcttgcccgagggagccaag
aacatccaggtggacagtccctacgatatcagccgggccccagacgagctgcattatacc
tacctagacacgttcggccgcccggtgattgtggcttacaagaagaatctcgtcgagcaa
cacattcaggacattgtggtgcactacacgttcaacaaggttctcatgctgcaggagccg
ctgctggtcgtggccgccttctacatcctgttcttcaccgtcatcatctacgtccgtctg
gacttttccatcaccaaggatccagctgcagaagccaggatgaaagtggcctgtatcaca
gagcaggtcttaaccctggtcaacaagaggctgggcctctaccgtcactttgatgagact
gtcaatagatacaagcagtcccgggatatctctaccctcaacagtggcaagaagagccta
gagacagagcacaaggctgtgaccagcgagattgctgtactgcagtctcggctgaagacg
gagggctcagacctgtgtgacagggtgagtgagatgcagaagctggacgcccaggtcaag
gagctggtcctgaagtcggcggtagaagcagagaggctggtggctggcaagctcaagaag
gatacgtacctggaaaacgagaagctcagctcaggaaaacgccaggagctggtcaccaag
atcgaccacatcctggatgctctgtag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (67)   
   RefSeq(nuc) (1)   
   GenBank (33)   
   EMBL (33)   
Protein domain (5)   
   Pfam (5)   
All databases (103)   

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