KEGG   Mus musculus (house mouse): 104884
Entry
104884            CDS       T01002                                 
Symbol
Tdp1, 2810481F14Rik, 4921509N21Rik, E430034L06Rik, Gm40556, MLZ-501, SCAN1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104884 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    104884 (Tdp1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104884 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 104884
NCBI-ProteinID: NP_001366001
MGI: 1920036
Ensembl: ENSMUSG00000021177
Position
12:99850767..99921482
AA seq 668 aa
MSQESSYGKWTISSSDESEDEKPKPDKPSASSHPQAGQGVSKELIYTCSEARKVAHKRQI
SPVKFNDADSVLPHKKQKSDSPEGLGWCLSSSDDDQQPDVTQQEQPKRVLPQEKKHVSSP
DVTTAQKVVDRSPPASLRPQRADDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKAKYN
SKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKNPILLVHGDKREAKADLH
AQAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGIWLS
PLYPRIDQGSHTAGESSTRFKADLTSYLTAYNAPPLQEWIDIIQEHDLSETNVYLIGSTP
GRFQGSHRDNWGHFRLRKLLQAHAPSTPKGECWPIVGQFSSIGSLGPDESKWLCSEFKDS
LLALREEGRPPGKSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQRWLHSYFHK
WSAETSGRSNAMPHIKTYMRPSPDFSKLAWFLVTSANLSKAAWGALEKNGTQLMIRSYEL
GVLFLPSAFSSPVLLHPRGFQDGTAGRYLQLLLFPTGHSGRSMPAVLHQPLLPSLGLLSS
GFAPRSRLQASLLPAARWSLLITVQPPGVPPFSLQPVTPDHQATHTPSLPTPLQFFYIYF
IILYVMFP
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgtcccaagaaagcagctacgggaagtggacaatatccagtagtgacgaaagcgaggat
gagaagcccaaacctgataagccgtcagcatcctctcacccccaggctgggcagggagtg
tcgaaggagctcatatacacctgctcagaggcccgcaaggttgcacacaagagacagatc
tcacctgtgaagttcaacgacgcagactcggtgctaccccacaagaagcagaagagtgac
tccccggaaggtctcggctggtgtctctccagcagcgatgatgaccagcagccagatgtg
acacagcaggaacagcctaagagagtgctgcctcaagagaaaaaacatgtctcctcaccc
gatgtgactactgcccagaaagttgtggatagaagccctcctgccagccttaggccccaa
agggcagacgatgagtacgagacctcaggggaaggccaggacatctgggacatgctggat
aaggggaaccccttccagttttatctcactagagtgtcggggattaaggcaaagtacaac
tccaaagccctccacatcaaggatattttatcccctctgtttgggacacttgtctcttca
gctcagtttaactactgctttgacgtggactggctcataaagcaatatccaccggaattc
aggaagaacccgatcctgcttgtgcacggtgataagagggaagccaaggcagacttacat
gcccaggcgaagccctatgcgaacatttccctctgccaggcaaagttggatattgcattt
ggaacacaccacacgaaaatgatgctcttgctctatgaagaaggcctccgagttgtcatc
cacacctccaacctcatccgggaagactggcaccagaaaacccaaggaatatggttgagc
cctttgtacccaagaattgaccagggaagccacacagctggagagtcaagcacccgtttc
aaagctgacctcaccagttatctaacggcgtataacgctccccctctgcaggagtggata
gacatcatccaagagcatgacctctctgagaccaatgtttacctcattggttcaacccct
ggacgctttcaaggaagtcacagagataactggggacattttaggcttagaaagcttctg
caagcgcatgccccgtccacacccaagggcgagtgctggcctatcgtgggtcagttctca
agcatcggctccctggggcccgatgaatccaagtggctgtgctcggagtttaaagacagc
ttgctggcactgagagaggaaggccgacctccgggcaagagtgcagttcctcttcatctg
atctatccctctgtggaaaatgtgcggaccagcttagaaggataccctgctgggggctct
cttccctatagcatccagacggctgaaaagcagaggtggctgcactcctacttccacaag
tggtcagcagagacatccggccgaagtaatgccatgccacacattaagacgtacatgagg
ccctcgccagacttcagtaaactggcttggttcctggtcacaagtgcgaatctgtccaag
gctgcctggggggcactggagaagaacggcacccagctgatgatacgctcctacgagctc
ggggtcctcttcctcccgtctgcgttttcctcacctgtcctcctccaccccagagggttt
caggatggaactgctggcagatatcttcagctccttctctttcctactggccacagtggc
cggagcatgccagctgttctgcatcagcctctgcttccttccctgggtctcctttcttca
ggcttcgctcccagaagccgtttgcaagcctcccttcttcctgctgccagatggtctctg
ttgatcacagttcagcctcctggtgtgcctcccttctccctccagccagtgactcctgac
caccaagccacacacaccccctcgctgccaacacctcttcagtttttttatatttatttt
attattttatatgttatgtttccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (31)   
   RefSeq(nuc) (7)   
   GenBank (12)   
   EMBL (12)   
Protein domain (1)   
   Pfam (1)   
All databases (60)   

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