KEGG   Mus musculus (house mouse): 105193
Entry
105193            CDS       T01002                                 
Symbol
Nhlrc1, B230309E09Rik, EPM2B
Name
(RefSeq) NHL repeat containing 1
  KO
K10602  E3 ubiquitin-protein ligase NHLRC1 [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105193 (Nhlrc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    105193 (Nhlrc1)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105193 (Nhlrc1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105193 (Nhlrc1)
SSDB
Motif
Pfam: NHL zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 Baculo_IE-1 Prok-RING_4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 105193
NCBI-ProteinID: NP_780549
MGI: 2145264
Ensembl: ENSMUSG00000044231
UniProt: Q8BR37 Q0VF71
Position
13:complement(47166033..47168326)
AA seq 401 aa
MGEEATAVAAAGVRPELVREAEVSLLECKVCFERFGHWQQRRPRNLPCGHVVCLACVAAL
AHPRTLGLECPFCRRACRACDTSDCLPVLHLLELLGSTLHASPAALSAAPFAPGTLTCYH
AFGGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKIFDSGGGGAHQFGEKGDAAHDVKYPL
DVAVTNDCHVVVTDAGDCSLKVFDFFGQIKLVVGKQFSLPWGVEITPHNGVLVTDAEAGT
LHLLEADFPEGVLRRIERLQAHLCSPRGLAVSWLTGAIAVLEHPCAFGRTGCNNTRVKVF
NSTMQLIGQVDSFGLNLLFPSKVTASAVTFDHQGNVIVADTSGPAIVCLGKPEEFPALKP
IITHGLSRPVALAFTKENSLLVLDTASHSIKVFKVMEGNGG
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgggggaggaggcgacggcggtggcagcggctggggtgcggcccgagctggtgcgggag
gcggaggtcagcctgctggagtgcaaggtgtgcttcgagaggttcggccactggcagcag
cggcgcccgcgcaacctgccctgcggccacgtggtctgcttggcctgtgtcgccgctctc
gcgcacccgcggacgctgggcctcgagtgtcccttctgccggcgggcctgccgagcctgt
gacaccagcgattgcctgccggtgctgcacctcctggagctcctgggctccaccctccac
gcgtccccggctgccctcagcgccgcccccttcgcgccggggactctcacctgctaccac
gccttcggcgggtgggggaccctagtgaaccccacagggcttgcactgtgccccaagacc
ggacgggtagtggtcgtgcacgacgggaagagacgggtcaagatctttgactccggagga
ggaggtgcacaccagtttggagaaaagggggacgcagcgcacgacgtgaagtacccactg
gatgtcgccgtcaccaacgactgccatgtggttgtcaccgacgctggcgactgctccctc
aaagtgtttgatttctttggccagatcaagctggttgtgggaaagcagttttccctgcct
tggggtgtggagatcacccctcacaatggggtcctggtgactgatgcagaggcagggact
ttgcacctgctggaagcggatttccctgaaggggtccttcggaggattgagaggttgcaa
gctcacctatgcagtccccgtgggttggcagtgtcatggctcacgggggccatcgcggtc
ctagagcatccttgtgcctttgggaggactggctgtaacaacacaagggtgaaggtgttc
aactccactatgcagctgattggccaggtggatagcttcgggctgaacctcctcttcccc
tccaaagtaactgcctctgctgtgaccttcgatcaccaaggaaacgtgattgttgctgac
acctctggtccagccatcgtctgcttggggaaacccgaagaattcccagccctgaagcct
ataatcactcacggcctctcccgtcctgtggcactggccttcaccaaggagaattctctt
cttgtgctggatactgcatcccattctataaaagtctttaaagtgatggagggcaacgga
gggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (11)   
   Pfam (11)   
All databases (49)   

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