KEGG   Mus musculus (house mouse): 108121
Entry
108121            CDS       T01002                                 
Symbol
U2af1, 2010107D16Rik
Name
(RefSeq) U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108121 (U2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    108121 (U2af1)
Spliceosome [BR:mmu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108121 (U2af1)
 Complex B
    108121 (U2af1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2 KMP11
Other DBs
NCBI-GeneID: 108121
NCBI-ProteinID: NP_001157241
MGI: 98884
Ensembl: ENSMUSG00000061613
UniProt: Q9D883 G3UW94
Position
17:complement(31866055..31878122)
AA seq 239 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggaatacttggcctccatcttcggcaccgaaaaagacaaagtcaactgttcattt
tatttcaaaatcggagcatgtcgtcatggagacagatgttctcggttgcacaataaacca
acctttagccagaccatcttgattcaaaacatctatcgtaatccccaaaacagtgcacag
acggctgacggctcacactgtgctgtgagcgacgtggagatgcaggagcactatgatgag
ttctttgaggaagtcttcactgagatggaagagaagtacggggaagtcgaggagatgaac
gtctgcgacaacctaggggaccacctggtggggaacgtgtatgtcaagtttcgacgtgag
gaggatgcagagaaagccgtgatcgacttgaataaccgttggtttaatggacagccgatc
catgcagagctgtccccagtaactgacttcagggaagcctgctgccgccagtatgaaatg
ggagagtgcacaagagggggcttctgcaacttcatgcatttgaagcccatctcaagagag
ctacgacgggagctgtatgggcgccggcgcaagaagcatagatccaggtcccgatccagg
gaacggcgttcccgatccagagaccgtggacgcggtggtggaggtggaggtggaggtggc
ggaggacgggagcgtgacaggaggcggtcaagagaccgggagagatctggacgattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (29)   
   RefSeq(nuc) (5)   
   GenBank (12)   
   EMBL (12)   
Protein domain (6)   
   Pfam (6)   
All databases (110)   

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