KEGG   Mus musculus (house mouse): 109241
Entry
109241            CDS       T01002                                 
Symbol
Mbd5, 9430004D19Rik, C030040A15Rik, Gm1630
Name
(RefSeq) methyl-CpG binding domain protein 5
  KO
K23219  methyl-CpG-binding domain protein 5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109241 (Mbd5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    109241 (Mbd5)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     109241 (Mbd5)
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    109241 (Mbd5)
SSDB
Motif
Pfam: PWWP MBD
Other DBs
NCBI-GeneID: 109241
NCBI-ProteinID: NP_001277585
MGI: 2138934
Ensembl: ENSMUSG00000036792
UniProt: B1AYB6
Position
2:48839511..49209702
AA seq 1498 aa
MNGGKECDGGDKEGGLAAIQVPVGWQRRVDHNGVLYISPSGSLLSCLDQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADDDVTKLCIHKRKIIAVATLHQSMEAPH
PSLVLTSPGGGTNATPVVPSRAATPRSVRNKSHEGITNSVMPECKNPFKLMTGSSNAMGR
LYMQDLPGSQQQELHPVYPRQRLGSSEHGQKSPFRGSHGGLPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPGFHGAPNSSPIHLNRTPLSPPSVMLHGSPVQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSTNMEIPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPVNQNPIIINPTSFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNHG
SHVQRIQHSASTSLSPSPVTSPVHMMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPVGPQ
ATCSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGMSNVLNTPSSAA
FPTAPAGNGSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNSS
SSNNSGAVASSGNTEGHSTLNTMFPPTANMLLPTGEGQSGRAALRDKLMSQQKDSLRKRK
QPPTTVLSLLRQSQMDSSAAPKPGPDLLRKHGQGSFPISSMSQLLQSMSCQSSHLSSNST
PGCGGSNTALPCSANQLHFPDPNMNSTVLQNSLTQSIPLRGEAVHCHNANTNFVHSNSPV
PNHHLAGLINQIQASGNCGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQT
SSEAGGSSLPSSIAIAGSNHPAITKTTSVLQDGVIVTTAAGNPLQSQLPIGSDFPFVGQE
HALHFPSNSTANNHLPHPLNPSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGDISSIN
NSLNNHQLTHLQSLLNSNQMFPPNQQPQQHLLQGHQNLQAFQGQPTVPCPANNNPMACLF
QNFQVRMQGDAALLNKRISTQPGLTTLPENPNLALPHFQDTPCELQPRIDLGQPMKDGLV
MGGQGDASVDAIYKAVVDAASKGMQVVITTAVNSTTQISPIPALSAMSAFTASIGDPLNL
SSAVSAVIHGRNMGGVDHDGRLRNARGARLPKNIDHGKNSSEGDGFECFKSASCHTSRKQ
WDGEQSPRGERNRWKYEEFLDHPGHIHSSPCHERPNNVSTLPFLAGEQHPILLPPRNCQG
DKILEENFRYNNYKRTMMSFKERLESTVERCTHINGNRPRQSRGFGELLGTAKQDLVLEG
QSPGSSNSLESSLVKDYIHYNGDFNAKTINGCVPSPSDAKSISSEDDLRNPDSPSSHELI
HYRPRTFNVGDLVWGQIKGLTSWPGKFIREDDVHNSCQQSPEEGKVEPEKLKTLTEGLEA
YSRVRKRSRKSGKLNNHLEAAIHEAMSELDKMSGTVHQIPQGDRQMRPPKPKRRKISR
NT seq 4497 nt   +upstreamnt  +downstreamnt
atgaatggaggcaaagagtgtgacggaggagacaaggaaggaggtcttgcagctatccag
gttcctgtgggttggcagcggcgtgtggaccataatggcgtgctgtacatcagtcccagt
gggtctttgttatcttgcttggaccaggttaagacatacctgctcactgacggaacatgc
aagtgtggcttggaatgtcctcttattcttcccaaggtgtttaattttgatcctggagct
gctgtgaagcagagaactgcagaagatgttaaggcagatgatgatgtcacaaagctatgc
atacataaaagaaagatcattgcagtggccacactccatcaaagcatggaggccccgcat
ccttctctggtgctcaccagtcctggaggaggaacaaatgcaactccagtagtaccttca
cgggcggcaactccaagatcagtaagaaacaagtctcatgaaggaattacaaattctgta
atgccagaatgtaagaatcctttcaagttaatgactggatcatcaaatgccatgggaagg
ctatacatgcaagacctgcctggaagccagcagcaggagctccaccctgtctacccccgc
cagagattgggcagtagtgagcatggacagaaatctccatttcgtggcagccatggaggc
ctgcctagcccagcatcatcagggtctcagatctatggagatggctcaatctctccaagg
actgacccgctcggaagccctgatgtcttcacaagaaataaccctggttttcatggagct
cccaattccagccctattcacctaaataggactcctctttctccaccttcagtaatgcta
catggttctcccgtacagtcatcctgtgcaatggctggaagaactaatatacctctttcc
ccaaccttgactacaaagagtccagtaatgaaaaaaccaatgtgtaatttttcaactaat
atggaaataccacgagcaatgttccaccacaaaccaccccaaggcccacctccccctcct
ccaccttcttgtgctcttcagaaaaagccattaacatctgagaaagatccacttggcatt
cttgaccctattcctagtaaaccagtgaatcagaaccctattatcattaatccaaccagt
ttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgctgtt
gttcctttgccaagtaatctccctttgccaactgtaaaacctggtcatatgaatcatggg
agtcatgtacaaagaattcagcattcagcttcaacctccctgtccccttctccagtgaca
tccccagtgcacatgatggggactggaattggaaggattgaggcatcgccccaaagatca
cgctcatcttccacatcatcagatcatggaaatttcatgatgccacctgtaggaccccag
gccacttgtagtggcataaaggttccacctaggtcaccaaggtcaacaataggttcccca
aggccatcaatgccatcaagcccttctaccaagtctgatggacatcatcagtacaaggat
atccctaacccattaattgctggaatgagtaatgtactcaataccccaagcagtgcagct
tttcctactgcacctgccggaaatggttctgtaaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaaccagcacaatgctgcctcctttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaacaaacttgctggtaacaacagtagc
agcagtaacaattctggagctgttgccagcagcggcaacactgaaggacacagcacttta
aacaccatgttccctccaactgccaacatgcttctcccaacaggtgaaggtcaaagtggt
cgagcagcactaagagataagttgatgtctcagcaaaaagactcattacggaaaagaaag
cagccacccaccacagtgttgagtttgctcagacagtcccaaatggatagttctgcagct
cctaaacctggacctgacttgctaaggaagcatgggcaggggtcatttcccatcagttca
atgtctcagttactacagtctatgagttgtcaaagctctcacttgagtagcaatagtacc
ccgggttgtgggggatcaaatactgctttgccttgctctgctaaccagctgcattttcca
gatcctaatatgaattccactgttcttcagaattcactgacacagagcatacctttaaga
ggggaagccgtgcactgccacaatgcaaacactaactttgttcacagtaacagtccagtc
cccaaccaccatcttgcaggtttaataaatcagattcaggctagcgggaactgtgggatg
ctcagtcagtcgggcatggctttaggaaactcattacatcccaatccacctcagtcaaga
atttcaacgtcctccactccagtgataccaaacagcattgttagcagctataatcaaaca
agttctgaagcaggtggttcaagcctgccgtcctccatagctatagctggcagcaaccac
cctgccatcacaaagacaacatctgttctccaagatggtgtcatagtcaccaccgcagct
ggaaacccactgcagagtcagctgcccattgggagtgactttccttttgttggccaagag
catgcccttcattttccatccaacagcaccgcaaacaaccatcttccacaccccttgaac
cccagcctcctcagctctctacctatctctttgccagtgaatcaacagcatctcctaaac
cagaatctattaaatatcctccagccttcagcaggagaaggtgatatatcatccataaac
aattcattgaataaccatcaactgactcatctacagtcgctactaaacagcaatcagatg
tttcctccaaatcagcagccgcagcaacaccttctccagggacaccagaatctccaggcc
ttccaaggacaacccacagtcccttgcccagctaacaataaccccatggcttgtctgttt
cagaacttccaggtgaggatgcaaggagatgcagctcttctaaataaaagaataagcact
cagcctgggctcacaacacttcctgaaaacccaaaccttgcacttccacatttccaagat
acaccctgtgagctgcagccaaggattgaccttggtcagcctatgaaggacggcctcgtt
atgggtggccaaggagatgcctccgtagacgccatttacaaagcagttgtggatgcagcc
agcaaaggaatgcaggttgtcatcaccactgctgtcaacagcacgactcaaatcagccct
atcccagccctgagcgccatgagtgccttcactgcctccattggtgacccattaaatctg
tccagtgctgtgagcgctgtcatccacgggcggaacatgggaggagtggatcatgatggc
aggctgaggaatgcgagaggggcacggctacccaagaacatagaccatgggaagaactcc
agcgaaggagacgggtttgagtgtttcaagtcagcgagctgccacacatccagaaaacag
tgggatggggagcaaagtcccagaggggagcgcaacaggtggaagtatgaggagttttta
gatcatccaggccatatccacagtagtccttgccacgaaaggcccaacaatgtctctaca
ctgccatttctagctggggaacagcacccgatactgttaccaccaagaaactgtcaaggt
gataagattctggaggaaaatttcaggtataataattacaaaagaactatgatgagtttt
aaagagagactagagagtactgtggagagatgtacacacattaacggaaacagacctcgt
cagagtcggggctttggagagctgctaggcactgcaaaacaagacctagttctagagggg
cagtctccgggttcttcaaatagtttggaaagttctctggtcaaagactacatccattac
aatggagactttaatgccaaaaccattaatgggtgtgtgcctagtccctcagatgctaaa
agcattagtagtgaagacgacctacggaatccagactccccctcctcacatgagttgata
cactatagaccaaggacgttcaacgttggcgacttggtctggggccaaatcaaaggactg
acttcctggcctgggaaattcataagagaagacgacgttcacaattcatgccaacaaagc
cccgaggaagggaaggtggagcccgagaagttgaagactctcacagaaggtttagaagcc
tacagccgcgtccggaaaaggagcagaaaaagtgggaaactaaataaccatttagaagct
gctattcacgaggccatgagcgaactggacaaaatgtctgggactgttcaccaaatccca
cagggtgacagacaaatgaggccccccaaacccaagaggaggaagatctccagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (20)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (18)   
DNA sequence (44)   
   RefSeq(nuc) (20)   
   GenBank (12)   
   EMBL (12)   
Protein domain (2)   
   Pfam (2)   
All databases (97)   

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