KEGG   Mus musculus (house mouse): 110880
Entry
110880            CDS       T01002                                 
Symbol
Scn4a, Nav1.4, SkM1, mH2
Name
(RefSeq) sodium channel, voltage-gated, type IV, alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    110880 (Scn4a)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   110880 (Scn4a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 110880
NCBI-ProteinID: NP_573462
MGI: 98250
Ensembl: ENSMUSG00000001027
UniProt: Q9ER60 G3X8T7
Position
11:complement(106208374..106256385)
AA seq 1841 aa
MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAMEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGVPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YGNDTWYGNDTWYGNDTWNSQESWVSNSTFDWEAYINDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAK
AAQALEGGEEADGDPTHSKDCNGSLDTSGEKGPPRPSCSAESAISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCAPWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIAFAKTFLLGLLHG
KILSLKDIMLSLGEPGGAGENGESPPEDEKKEPPPEDGNKELKDNHILNHVGLTDGPRSS
IEMDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDIKKPLQPLYDGNSSVCS
TADYKPPEEDPEEQAEENPEGELPEECFTEACVKRCPCLYVDISQGRGKMWWTLRRACFK
IVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIQTILEYADKVFTYIFILEMLLKWVA
YGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGM
RVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISVVNNK
SECESLMYTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPDYE
VNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILY
NINMVFIIVFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTL
FRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAY
VKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKG
DCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEK
FDPDATQFIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKE
VLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRS
VKQASYMYRHSQEGNGDGAPEKEGLLANTMNKMYGSEKEDNGVQSQGEKEKDSTEDAGPT
TEVTAPSSSDTALTPPPPSPPPPSSPPQGQTVRPGVKESLV
NT seq 5526 nt   +upstreamnt  +downstreamnt
atggccagctcatctctgcccaccctggtcccccctggtccccactgcctgcgccccttc
accccagagtccctggcagccatagaacagcgggcaatggaggaggaagcccggctgcag
cggaacaagcaaatggagattgaagagcctgagcggaagccacgcagtgacctggaagct
ggcaagaacctcccactcatctatggggaccccccacctgaagtcattggcgtccccctg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggaaag
gccatcttccgattctctgccacccctgccctctacatgctgagccccttcagcatcgtc
cggcgggtggctatcaaggtgctcatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcaacccgccttcttggtccaaggacgtg
gagtacaccttcacagggatctacacctttgagtccctcattaagatgctggcccgaggc
ttttgcattgatgacttcacattcctccgagacccctggaactggctggacttcagtgtc
atcacaatggcgtacgtgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgtgtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggagccctgatccagtctgtgaaaaagctctcggatgtgatgatcctcactgtcttctgc
ctgagcgtctttgccctggtggggctgcagcttttcatgggaaacctgcgtcagaagtgc
gtgcgttggcccccgcccatgaatgacaccaacaccacgtggtatggtaatgatacgtgg
tacggcaatgacacctggtacggcaatgacacctggtatggcaatgacacttggaacagc
caggagagctgggtcagcaactctacctttgactgggaggcctacatcaatgacgaaggg
aacttctatttcttggagggctccaatgatgccctgctctgtgggaatagcagtgatgcc
gggcactgccctgagggctacgaatgcatgaaggctgggaggaaccccaactatggctac
accagctacgacaccttcagctgggccttcctggctctcttccgtctcatgacgcaggac
tactgggagaaccttttccagctgacccttcgagccgctggcaagacctacatgatcttc
tttgtggtcatcatcttcctgggttccttctacctcatcaatctgatcctggcggtggtg
gccatggcatatgctgagcagaatgaggctaccctggccgaagaccaggagaaagaggag
gagttccaacagatgcttgaaaaattcaaaaaacatcaggaggaactggaaaaggcgaag
gctgcccaggctctggaaggtggagaggaggcagatggggacccaacccacagcaaagac
tgcaatggtagcctggatacatccggggagaaggggcccccaaggccaagctgcagcgca
gagagtgccatctcagatgctatggaggagctggaagaggcccatcagaagtgcccccca
tggtggtacaagtgtgcacacaaagtgctcatctggaactgctgtgccccgtgggtgaag
ttcaagcatattatcctcctgattgtcatggacccctttgtggacctgggcatcaccatc
tgcatcgtgctcaacaccctcttcatggccatggagcactaccccatgactgagcacttt
gacaacgtgctctctgtgggcaacttggtcttcacgggcatcttcactgcagagatggtg
ctgaagttgattgctatggacccctacgaatatttccaacagggctggaacatcttcgac
agcttcatcgtcaccctcagcctggtggagctgggcctggccaacgtgcagggcctatca
gtgctccgttctttccgtctgctgcgtgtcttcaagctggccaagtcatggccaacactc
aacatgctcatcaaaatcattggcaactcagtgggtgcgctgggcaacctgaccctggtg
ttggccatcatcgtcttcatcttcgccgtggtgggcatgcagctgtttggcaagagctat
aaggaatgcgtgtgcaagattgcctcagactgcagcctgccccgctggcacatgcacgat
ttcttccactccttcctcatcgtcttccgcatcctctgtggggagtggatcgagaccatg
tgggactgcatggaagtggccggccaggccatgtgcctcaccgtcttcctcatggtcatg
gtcattggcaacctggtggtcctgaatctgttcctggctctcctgttgagttccttcagc
gctgacagtctggcagcgtcagatgaagatggtgagatgaacaacctacagatcgccatc
gggcgtatcaagtggggcatcgcctttgccaaaaccttcctcttggggctgttgcatggc
aagatcctgagcctcaaagacataatgctcagtctcggggagcctgggggtgctggggaa
aacggggagagccctcccgaggatgagaagaaggaaccacctccggaagatgggaacaag
gagctgaaagacaatcatatcctgaaccacgtgggcctgactgatggaccccgctccagc
atcgagatggaccaccttaacttcatcaacaacccctacctcactatccatgtgcccatt
gcctccgaggagtccgacttggaaatgcccacagaggaggagactgacaccttctcggag
cctgaggacatcaagaagccactacagcctctgtacgacgggaactcctccgtctgcagc
acagctgactacaagccccccgaagaggaccctgaggagcaggctgaggagaaccctgag
ggggagctacctgaggagtgtttcacagaggcctgtgtgaagcgctgcccctgcctctat
gtggacatctcccagggccgcgggaaaatgtggtggacactccgcagggcctgcttcaag
attgttgagcacaactggtttgagaccttcatcgtcttcatgatcttgctcagcagcggg
gccctggccttcgaggacatctacattgaacagcggcgagtcatccaaaccatcctggaa
tatgctgacaaggtcttcacctacatcttcatcctggagatgctgctaaagtgggtggcc
tacggcttcaaggtgtacttcaccaacgcctggtgctggctcgacttcctcattgtggat
gtctccatcatcagtctggtggctaactggctgggctactctgagctggggcccatcaaa
tccctgcgcacgctccgggccctgcgacctctgagggcactgtcccgatttgaaggcatg
agggtggtggtgaacgcccttctgggagccatcccttccatcatgaacgtgctccttgtc
tgcctcatcttctggctcatcttcagcatcatgggggtcaacttgtttgctggaaagttc
tactactgcatcaacacaaccacctccgagagattcgacatctctgtggtcaacaacaag
tccgagtgtgagagcctcatgtacaccggccaggtccgctggatgaacgtcaaggtcaac
tatgacaacgtgggtctcggctacctctctcttcttcaggtggccactttcaagggttgg
atggacatcatgtatgcagctgtggactcccgggagaaagaggagcagccagactacgag
gtgaacctctacatgtacctttacttcgtcatctttatcatcttcggctccttcttcacc
ctcaatctcttcattggcgtcatcattgacaacttcaaccaacagaagaagaagtttgga
gggaaagacatcttcatgacagaggaacagaagaaatactacaatgcgatgaagaagctt
ggctccaagaagccccagaagccaatcccccggcctcagaacaagatccaaggcatggtg
tacgacttcgtgacaaagcaggtgtttgacatctctatcatgatcctcatctgcctcaac
atggtgacgatgatggtggagacggatgaccagagccagctcaaggtggacatcctgtat
aacatcaacatggtcttcattatcgtcttcacaggggagtgtgtgctcaagatgtttgcc
ctgcgccattactacttcaccattggctggaatatcttcgacttcgtggttgtcatcttg
tccattgtgggtctcgcactctctgacttgatacagaaatactttgtgtcacccacactg
ttccgtgtgatccgattggctcggatcgggcgtgtcttgcgtctgatccgtggggccaag
ggcatccggacgctgctgttcgccctgatgatgtccctgcccgccctcttcaacatcggc
ctccttctctttctggtcatgttcatttactccatcttcggcatgtctaacttcgcctac
gtcaagaaagagtcgggcatcgacgacatgttcaactttgagacctttggcaacagtatc
atctgcctcttcgagatcaccacgtcagctggctgggacgggcttctgaaccccatcctc
aacagtgggcccccagactgtgacccgacattggagaacccaggcaccaatatcaagggt
gactgcggcaacccatccatcggcatctgtttcttctgcagctacatcatcatctccttc
ctcatcgtggtcaacatgtacattgccatcatcctagagaatttcaatgtggccactgaa
gagagcagtgagcccctctgtgaggatgacttcgagatgttctatgagacctgggagaag
tttgaccccgatgcaactcagttcatcgactacagccgcctttctgactttgtggacacc
ctgcaggagcccttgaaaattgccaagcccaataagatcaagcttatcacattagacctg
cccatggtacccggggacaagatccactgcctggacatcctctttgccctgaccaaagag
gtactgggtgactctggggaaatggatgctctcaaacagaccatggaggagaagttcatg
gcagctaacccctccaaggtctcctatgagcccatcaccaccaccctcaagaggaagcag
gaggaggtgtgtgctatcaaaatccagagggcttaccgccgccatctgctgcagcgctct
gtgaagcaggcctcttacatgtaccgccacagccaggaaggcaatggcgatggggcccct
gagaaggagggattgcttgccaacaccatgaacaagatgtatggctctgagaaagaggac
aacggtgtgcagagccagggggagaaagagaaagactcaacagaggatgctggacccacc
acggaggtcacagcccccagcagctcggacactgccctgactcctcctcctccttctcct
cctccaccatcatcaccaccacaagggcagacagtgcgcccaggggtcaaagagtctctt
gtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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