KEGG   Mus musculus (house mouse): 116733
Entry
116733            CDS       T01002                                 
Symbol
Vps4a, 4930589C15Rik
Name
(RefSeq) vacuolar protein sorting 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03250  Viral life cycle - HIV-1
mmu04144  Endocytosis
mmu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116733 (Vps4a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116733 (Vps4a)
  09143 Cell growth and death
   04217 Necroptosis
    116733 (Vps4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    116733 (Vps4a)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    116733 (Vps4a)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    116733 (Vps4a)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    116733 (Vps4a)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_14 AAA_16 AAA_22 AAA_25 AAA_5 RuvB_N IstB_IS21 AAA_17 AAA_18 DUF815 AAA_2 AAA_33 RNA_helicase nSTAND3 AAA_24 PhoH ResIII AAA_28 AAA_7 Mg_chelatase NACHT Parvo_NS1 bpMoxR AAA_30 YhdB DUF5906 TPR_2
Other DBs
NCBI-GeneID: 116733
NCBI-ProteinID: NP_569053
MGI: 1890520
Ensembl: ENSMUSG00000031913
UniProt: Q8VEJ9
Position
8:107757901..107772392
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccatcgatctggtgacaaaagccacagaagaggat
aaagccaagaactacgaggaggcactccgtctctaccagcatgctgtggagtatttcctc
cacgccatcaaatatgaagcacacagtgacaaggccaaggagagcattcgagcaaagtgc
atgcagtacctagacagagcggagaagctgaaggattatttacgaaacaaagagaaacat
ggcaagaagccagtcaaagagaaccagagtgaaggcaagggtagtgacagtgacagtgaa
ggggataatccagagaaaaagaagttacaagaacaattgatgggtgctgttgtgatggag
aagccgaacatacggtggaatgatgtagctggactggagggggctaaagaggctctcaaa
gaagctgtgattttgccaattaaattcccacacttattcacaggcaaacgcactccttgg
cgaggcatactcctctttgggcccccaggcacaggcaagtcctacctggccaaagccgtg
gcaacagaagccaacaactctaccttcttctctgtgtcctcctcggatctgatgtctaag
tggttgggggaaagcgagaagctagtcaagaacctgtttgagctggcccggcagcataag
ccttccatcatcttcattgatgaggtagattccctctgtgggtcacggaatgaaaatgag
agtgaagccgctcgtaggatcaaaacagagttcttggtccagatgcaaggagtggggaat
aataatgatggaactcttgttcttggtgccacaaacatcccctgggtgttggattcagcc
atcaggaggaggtttgaaaagcgaatttatatcccattgccagaggaagcggcccgtgcc
caaatgtttcggttacatctgggaagcacacctcacaacctcacagatgctaacattcac
gagctggcccgcaagacagaaggctactcaggagcagatatcagcatcattgtgcgggac
tccctcatgcagccagtcagaaaagtacagtcagcaacacacttcaagaaggtgtgtggc
ccttctcgaaccaaccctagcgttatgattgatgatcttctgaccccatgttctccggga
gatccaggggccatagagatgacttggatggatgtccctggtgataaactcttagagcct
gtggtttgcatgtctgacatgctccggtctttggccactacccggcccacagtgaatgca
gacgacctcctgaaagtaaagaaattctctgaggactttggacaggagagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
Protein domain (32)   
   Pfam (32)   
All databases (67)   

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