KEGG   Mus musculus (house mouse): 12021
Entry
12021             CDS       T01002                                 
Symbol
Bard1
Name
(RefSeq) BRCA1 associated RING domain 1
  KO
K10683  BRCA1-associated RING domain protein 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    12021 (Bard1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    12021 (Bard1)
   04121 Ubiquitin system [BR:mmu04121]
    12021 (Bard1)
   03036 Chromosome and associated proteins [BR:mmu03036]
    12021 (Bard1)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    12021 (Bard1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     12021 (Bard1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    12021 (Bard1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     12021 (Bard1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     12021 (Bard1)
SSDB
Motif
Pfam: zf-RING_6 Ank Ank_4 Ank_2 BRCT_2 Ank_3 BRCT Ank_5 zf-RING_5 zf-C3HC4 zf-C3HC4_2 DUF4901 zf-C3HC4_4 RYDR_Jsol zf-rbx1
Other DBs
NCBI-GeneID: 12021
NCBI-ProteinID: NP_031551
MGI: 1328361
Ensembl: ENSMUSG00000026196
UniProt: O70445
Position
1:complement(71066694..71142300)
AA seq 765 aa
MPRRPPRVCSGNQPAPVPAMEPATDGLWAHSRAALARLEKLLRCSRCANILKEPVCLGGC
EHIFCSGCISDCVGSGCPVCYTPAWILDLKINRQLDSMIQLSSKLQNLLHDNKDSKDNTS
RASLFGDAERKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQKAKDDKAQEASMYEFVSATP
PVAVPKSAKTASRTSAKKHPKKSVAKINREENLRPETKDSRFDSKEELKEEKVVSCSQIP
VMERPRVNGEIDLLASGSVVEPECSGSLTEVSLPLAEHIVSPDTVSKNEETPEKKVCVKD
LRSGGSNGNRKGCHRPTTSTSDSCGSNIPSTSRGIGEPALLAENVVLVDCSSLPSGQLQV
DVTLRRKSNASDDPLSLSPGTPPPLLNNSTHRQMMSSPSTVKLSSGMPARKRNHRGETLL
HIASIKGDIPSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKVVELLLQHNALVNTPGY
QNDSPLHDAVKSGHIDIVKVLLSHGASRNAVNIFGVRPVDYTDNENIRSLLLLPEENESF
STSQCSIVNTGQRKNGPLVFIGSGLSSQQQKMLSKLETVLKAKKCMEFDSTVTHVIVPDE
EAQSTLKCMLGILSGCWILKFDWVKACLDSKVREQEEKYEVPGGPQRSRLNREQLLPKLF
DGCYFFLGGNFKHHPRDDLLKLIAAAGGKVLSRKPKPDSDVTQTINTVAYHAKPESDQRF
CTQYIVYEDLFNCHPERVRQGKVWMAPSTWLISCIMAFELLPLDS
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgccacgccggccgccgagggtctgctctgggaaccagcctgctcccgtgcccgccatg
gagccggctaccgacgggctttgggcccacagccgcgcggcgcttgcccgcctggagaag
ctgctgcgctgctcccgctgtgctaatattctgaaggagcccgtgtgcttaggaggatgt
gagcacatcttctgtagtggttgtataagtgactgtgttggctcaggatgcccagtgtgt
tacaccccagcctggatcctagacctcaagataaaccgacaattggacagcatgatccag
ctttctagtaagctccaaaatttgctccatgacaataaagattcaaaagacaacacatct
agggcaagtttatttggtgatgcagaaaggaagaagaattcaataaaaatgtggtttagt
cctcgaagtaagaaggttagatatgttgtgactaaagtgtcagtacaaacacagcctcaa
aaggcaaaggacgacaaagcccaggaagcctcaatgtatgaatttgtttccgcaactccc
cctgtagctgttcctaagagtgctaaaacagcttctagaacatctgcaaaaaagcatcca
aagaaatctgtagctaagatcaacagggaggagaatttaaggccagaaacaaaggatagt
agatttgattccaaagaggagctgaaggaagagaaggttgtctcctgtagccaaatacca
gttatggagagaccacgggtaaatggtgaaatagacttattagcaagtggttctgttgta
gaacctgaatgttctggaagcttgactgaagtctctttaccattggctgagcatatagtg
tctccagacactgtgagcaagaatgaagagactccggagaagaaggtctgtgtaaaagat
cttcgttcaggagggagtaatggaaatcgtaaaggctgccacaggcctaccacttctact
tctgacagttgtgggagcaacattccgagcaccagcagaggcatcggtgagccagcattg
cttgcagaaaacgtagtgttggttgactgctcttcactgccttcaggccagctacaggtt
gatgtcacactcaggagaaagagtaacgcatcagatgacccccttagcctttcaccgggc
acacccccacctctgctgaacaattcaactcacagacaaatgatgtcaagcccctccaca
gtgaagctgtcttctggtatgccagccaggaaaagaaatcacagaggagagaccttactt
catattgcttctattaagggtgatataccttctgttgaatacctcttgcaaaatggaaac
gacccaaatgttaaagaccatgctggatggacaccgttgcatgaagcctgcagtcatggg
cacctgaaggtagtggagttgctgctccagcataatgccctggtgaacacccctggctat
cagaatgactcgccactccacgatgccgtcaagagtggccacatcgatatagtcaaggtg
ttactgtcccacggtgcttccaggaatgctgttaacatatttggtgtgcggcctgtggac
tatacagacaatgagaatataagatcattattgctgctgccagaggagaatgaatcattc
tcaactagccagtgctctatcgtgaacaccgggcagcgaaagaatgggccgctggtattt
ataggcagtgggctttcttcacagcagcagaaaatgctcagcaaacttgagacagttctt
aaggctaaaaagtgtatggaatttgacagtacagtaactcatgtcattgttcctgatgag
gaagcgcagagtactctgaagtgtatgcttgggattctcagtggatgctggatcctgaag
tttgattgggtgaaagcctgtctggacagcaaagtacgtgagcaggaagaaaagtatgaa
gttcctggaggtccacagaggagcaggctcaacagagagcagctgttgccaaagctgttt
gatggatgctacttctttttggggggaaacttcaagcatcatccaagggatgacctcctt
aagctcattgctgcagcaggaggcaaagtcctgagtcgcaagcccaagccagacagtgat
gtgactcagaccatcaacacggttgcataccatgccaagcctgagtcggatcagcgcttc
tgtacgcagtacatcgtctacgaagacctgtttaactgtcacccagagagggttcggcag
ggcaaagtctggatggctccgtccacctggcttatcagctgtataatggcctttgaattg
cttcctcttgacagctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (26)   
   RefSeq(nuc) (4)   
   GenBank (11)   
   EMBL (11)   
Protein domain (15)   
   Pfam (15)   
All databases (78)   

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