Entry |
|
Symbol |
Cacna1s, Cav1.1, Cchl1a3, DHPR, DHPR_alpha1s, fmd, mdg, sj
|
Name |
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit
|
KO |
K04857 | voltage-dependent calcium channel L type alpha-1S |
|
Organism |
mmu Mus musculus (house mouse)
|
Pathway |
mmu04261 | Adrenergic signaling in cardiomyocytes |
mmu04270 | Vascular smooth muscle contraction |
mmu04723 | Retrograde endocannabinoid signaling |
mmu04925 | Aldosterone synthesis and secretion |
mmu04927 | Cortisol synthesis and secretion |
mmu04935 | Growth hormone synthesis, secretion and action |
mmu05022 | Pathways of neurodegeneration - multiple diseases |
mmu05207 | Chemical carcinogenesis - receptor activation |
mmu05412 | Arrhythmogenic right ventricular cardiomyopathy |
|
Brite |
KEGG Orthology (KO) [BR:mmu00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
12292 (Cacna1s)
04020 Calcium signaling pathway
12292 (Cacna1s)
04024 cAMP signaling pathway
12292 (Cacna1s)
04022 cGMP-PKG signaling pathway
12292 (Cacna1s)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
12292 (Cacna1s)
04929 GnRH secretion
12292 (Cacna1s)
04912 GnRH signaling pathway
12292 (Cacna1s)
04921 Oxytocin signaling pathway
12292 (Cacna1s)
04935 Growth hormone synthesis, secretion and action
12292 (Cacna1s)
04924 Renin secretion
12292 (Cacna1s)
04925 Aldosterone synthesis and secretion
12292 (Cacna1s)
04927 Cortisol synthesis and secretion
12292 (Cacna1s)
09153 Circulatory system
04260 Cardiac muscle contraction
12292 (Cacna1s)
04261 Adrenergic signaling in cardiomyocytes
12292 (Cacna1s)
04270 Vascular smooth muscle contraction
12292 (Cacna1s)
09156 Nervous system
04727 GABAergic synapse
12292 (Cacna1s)
04725 Cholinergic synapse
12292 (Cacna1s)
04726 Serotonergic synapse
12292 (Cacna1s)
04723 Retrograde endocannabinoid signaling
12292 (Cacna1s)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
12292 (Cacna1s)
09164 Neurodegenerative disease
05010 Alzheimer disease
12292 (Cacna1s)
05020 Prion disease
12292 (Cacna1s)
05022 Pathways of neurodegeneration - multiple diseases
12292 (Cacna1s)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
12292 (Cacna1s)
05412 Arrhythmogenic right ventricular cardiomyopathy
12292 (Cacna1s)
05414 Dilated cardiomyopathy
12292 (Cacna1s)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
12292 (Cacna1s)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:mmu04040]
12292 (Cacna1s)
Ion channels [BR:mmu04040]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
12292 (Cacna1s)
|
SSDB |
|
Motif |
|
Other DBs |
|
Structure |
|
Position |
1:135980549..136047268
|
AA seq |
1852 aa
MEPPSPQDEGLRKKQPKKPVPEILPRPPRALFCLTLQNPLRKACISIVEWKPFETIILLT
IFANCVALAVYLPMPEDDNNTLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRS
GWNVLDFIIVFLGVFTVILEQVNIIQTNTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIFKAMLPLFHIALLVLFMVIIYAIIGLELFKGKMHKTCYFIGTDIVATVENE
KPSPCARTGSGRPCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCISMEGWTDVLYW
VNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLRGYMSWITQGEVMDVDDLREGKLSLDEGGSDTESLYEIEGLNKIIQFIRHWRQWNRV
FRWKCHDLVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTHLQDVANRVLLTLFTIEML
MKMYGLGLRQYFMSIFNRFDCFVVCSGILEILLVESGAMSPLGISVLRCIRLLRLFKITK
YWTSLSNLVASLLNSIRSIASLLLLLFLFIIIFALLGMQLFGGRYDFEDTEVRRSNFDNF
PQALISVFQVLTGEDWNSVMYNGIMAYGGPTYPGVLVCIYFIILFVCGNYILLNVFLAIA
VDNLAEAESLTSAQKAKAEERKRRKMSKGLPDKSEEERATVTKKLEQKSKGEGIPTTAKL
KIDEFESNVNEVKDPYPSADFPGDDEEDEPEIPVSPRPRPLAELQLKEKAVPIPEASSFF
IFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRADSMRNQILEYFDYVFT
AVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGLESSAISVVKILRVLR
VLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDL
SKMTEEECRGYYYIYKDGDPTQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLL
YKAIDSNEEDTGPVYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETEYKNCE
LDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYVVTSSYFEYLMFALIMLNTICLGMQHY
NQSEQMNHISDILNVAFTIIFTLEMVLKLIAFKPRGYFGDPWNVFDFLIVIGSIIDVILS
EIDTFLASSGGLYCLGGGCGNVDPDESARISSAFFRLFRVMRLVKLLNRAEGVRTLLWTF
IKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCA
TGEAWQEILLACSYGKLCDPESDYAPGEEHTCGTNFAYYYFISFYMLCAFLIINLFVAVI
MDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCP
HRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWKR
TSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKDTVQIQAGLR
TIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIFRRTGGLFGQVDNFLERTNSLPP
VMANQRPLQFAEIEMEELESPVFLEDFPQNPGTHPLARANTNNANANVAYGNSSHRNNPV
FSSICYEREFLGEADMPVTREGPLSQPCRASGPHSRSHVDKLKRPMTQRGMPEGQVPPSP
CQVTGAKAEHPVQKEGKGPTSRFLETPNSRNFEEHVPRNSAHRCTAPATAMLIQEALVRG
GLDSLAADANFVMATGQALADACQMEPEEVEVAATELLKQESPEGGAVPWEP |
NT seq |
5559 nt +upstreamnt +downstreamnt
atggagccgccctcaccccaggacgagggcctgaggaagaagcagccgaagaaacctgtt
cctgagattctgccgaggcccccgcgggccttgttctgcctgactctacagaaccccctg
aggaaggcctgcatcagcatcgtggaatggaaacccttcgagaccatcatcttgctcacc
atctttgccaactgtgtggccctggcagtgtacctgcccatgccagaggatgacaacaac
actctgaacctcggcctggagaaactggagtacttcttcctcattgtcttctccattgaa
gccgccatgaagatcatagcctacggcttcctattccatcaggatgcatacctgcgcagt
ggctggaacgttctggacttcatcattgtctttctgggggtcttcactgtgattctggaa
caagttaacatcattcaaaccaacacggcccccatgagcagcaaaggagccggcttggat
gtgaaggcccttcgagcattccgcgtgctcagacccctgcggctggtgtcgggggtgccc
agtcttcaggtggtcctcaactccatcttcaaggccatgctccccctgttccacattgcc
ctgctcgtcctcttcatggtcatcatctacgccatcattgggctggagctcttcaaaggc
aagatgcacaagacttgctacttcattgggacagacattgtagccacagttgagaatgag
aaaccatcaccctgtgctagaactggctctgggcgtccctgcaccatcaatggcagcgag
tgccgaggaggttggccaggacccaaccacggcatcacccacttcgacaactttggcttc
tctatgctcactgtgtatcaatgcatctccatggaggggtggactgatgtcctgtactgg
gtcaacgatgccatcgggaatgagtggccctggatctactttgtcaccctcattctgctg
ggctccttcttcatcctcaacctggtgctgggtgtcctgagtggagaattcaccaaagag
cgagagaaggccaagtccaggggaaccttccaaaagctccgagagaaacagcagctggag
gaggacctccgtggttacatgagctggatcacacagggcgaggtcatggacgtggacgac
ttgagagaaggcaagctgtctttggatgaagggggatcagacacagagagcttgtatgaa
atcgaaggcttgaacaaaatcatccagttcattcggcactggcgacagtggaatcgcgtc
ttccgctggaagtgccatgacctagtgaaatccaaggtcttctattggctggtgatcctg
atcgttgccctaaacaccctgtccattgcctcggagcaccacaaccagccactctggttg
acccatttgcaagatgttgccaaccgcgtgttgctgaccctcttcaccatcgaaatgctc
atgaagatgtacgggctgggcctgcgccagtacttcatgtccatcttcaaccgcttcgac
tgcttcgtggtgtgcagcggcatcctggagatcctgctggtggagtcgggagccatgtcg
cccctgggcatctctgtgctccgctgtatccgcctcctgaggctcttcaagatcaccaag
tactggacatcgctgagcaacctggtggcctcactgctcaactccatccgctccattgct
tccctcttgctgctgctctttctcttcatcatcatctttgccctgctgggcatgcagctc
tttggaggcagatatgactttgaagacacagaagtacgacgaagcaactttgacaacttc
ccccaggccctcatcagtgtcttccaggtcctgacgggtgaagactggaactctgtgatg
tacaatgggatcatggcttacggaggtccgacctaccctggtgtgctggtgtgcatttat
ttcatcatccttttcgtctgtggcaactacatccttctcaacgtcttcctggctattgct
gtggacaacctggcagaggcagagagtctgacatctgcccaaaaggccaaggctgaggag
agaaagcgcaggaagatgtcgaaagggctcccagacaagtcagaagaggagagggccacg
gtgaccaagaaactggagcagaagtccaagggtgaaggcatccccaccaccgccaagctg
aaaatcgatgagtttgaatcaaacgttaatgaggtgaaagacccctacccttcggctgac
ttcccaggggacgatgaggaagatgagcccgagatcccagtgagcccccgaccacgccct
ctggccgagctgcagctgaaagagaaagcagtgcccatcccggaggctagctccttcttc
atcttcagtcccaccaacaagatccgtgtcctgtgtcaccgcattgtcaatgccacctgg
ttcaccaacttcatcctgctcttcatcctgctcagcagtgccgccctggccgctgaggat
cccatccgggccgactccatgaggaatcagatcctcgagtattttgattatgtgttcact
gctgttttcacggtggagattgtccttaagatgaccacctatggagccttcctgcacaaa
ggctccttctgccgcaactacttcaacatcctggacctgctggtggtggctgtgtccctc
atctccatgggcctcgagtccagcgccatctccgtggtgaagatcttaagggttctgaga
gtgctgagaccactccgggccataaacagagccaaagggttgaagcacgtggtgcagtgc
gtgtttgttgccattcgcaccatcgggaacatcgtgctggtcaccacgctcctgcagttc
atgtttgcgtgcattggagtgcagcttttcaagggaaagttctacagctgcaatgactta
tccaagatgactgaagaggaatgcaggggctactactacatatacaaggatggagacccc
actcagatagagctgcgtccccgccagtggatacacaatgacttccactttgacaatgta
ctctccgctatgatgtcactcttcacggtctccaccttcgagggttggcctcagctactg
tacaaggccatagactcaaatgaggaggacaccggccctgtctacaacaaccgagtggag
atggccatcttcttcattatctacatcatcctcattgccttcttcatgatgaacatcttt
gtgggctttgtcatcgttaccttccaggaacagggagagactgagtataagaactgtgag
ctcgacaagaaccagcgccaatgcgtacagtatgccctgaaggcccgcccactgaggtgt
tacatccccaaaaacccataccagtatcaggtgtggtatgtcgtcacttcctcctacttt
gaatacctgatgtttgctctcatcatgctcaatactatctgcctgggcatgcagcattac
aaccagtcggaacagatgaaccacatctcagacattctcaacgtggctttcaccatcatc
ttcaccctggagatggtcctcaagctcatagctttcaagcccaggggctattttggagat
ccttggaatgtgtttgacttcctaatcgtcatcggcagcatcattgacgtcatcctgagc
gagatcgatactttcctggcctccagcgggggactgtattgcctgggtggaggctgcggg
aacgttgacccagatgagagcgcccgtatctccagtgccttcttccgcctgttccgggtc
atgagactggtcaagctgctgaaccgggcggagggtgtgcgcaccctgctgtggacattc
atcaagtccttccaggccctgccgtacgtggctttgctgatcgtgatgctcttcttcatc
tacgcggtcatcggcatgcagatgttcgggaagatcgccatggtggacgggacgcagata
aaccggaacaacaacttccagactttcccacaggccgtgctgctgctcttcaggtgtgcc
acaggggaagcctggcaagagatcctgctggcctgcagctatgggaagctgtgtgacccg
gagtctgactacgcacccggggaggagcatacatgcggcaccaacttcgcctactactac
ttcatcagtttctacatgctctgcgccttcctgatcatcaacctctttgtggctgtcatc
atggacaactttgattacctcacaagggactggtccattctgggccctcaccacctggac
gagttcaaggccatttgggctgagtacgacccggaggctaagggcaggatcaagcacctg
gatgtggtgaccctgctgaggaggattcagccccctctgggctttgggaagttctgccca
cacagggtagcatgtaagaggctggtgggcatgaacatgcccctgaacagcgatggcaca
gtcacctttaatgccacactatttgccctggtgcgcacagccctcaagatcaagacagaa
ggcaactttgaacaagctaacgaggagctgagagccatcatcaagaagatctggaagaga
accagcatgaagctcttggaccaagtcatccctccaataggagatgatgaggtgacagta
gggaaattctatgccacattcctcatccaggagcacttccggaagttcatgaagcgccag
gaggaatattatgggtatcgacccaaaaaggacacagttcagatacaggctggattacgg
accatagaggaagaggcagctcctgagatccaccgtgccatctctggagacctgacagca
gaggaggaactggagagggccatggtagaggctgccatggaggaggggatattccggagg
acgggaggcctgtttggtcaagtggacaacttcctggaaaggaccaactctctgccccct
gtcatggccaaccaaagacccctccaatttgctgaaatagagatggaagagctggagtca
ccagtcttcttggaggacttccctcagaacccaggcacccaccctcttgctcgtgccaat
accaacaacgccaatgccaatgttgcctatggcaacagcagccatagaaacaacccagtg
ttttccagcatctgctatgaacgggagttcttgggagaggcggacatgcctgttaccaga
gaaggacccctcagtcagccctgcagggcctcaggacctcacagcagatctcatgtggac
aaactgaaaagaccgatgacccagagaggaatgcctgaaggccaggtgcctccttccccg
tgccaggtaacaggggcaaaagcagagcatcctgtgcagaaagagggaaagggccccacg
tcacggtttctggaaacacccaacagcaggaactttgaggagcacgttcccaggaattcg
gctcacaggtgcacggctccagctactgccatgctgatccaggaggctctggttcgagga
ggactagactccttagcagcagatgctaacttcgtcatggcaacaggccaggccctggca
gatgcctgccagatggaaccagaggaagtcgaggtggcagcaacagagctactgaagcaa
gaatccccagagggcggggccgtgccctgggagccttga |