KEGG   Mus musculus (house mouse): 12479
Entry
12479             CDS       T01002                                 
Symbol
Cd1d1, CD1.1, Cd1a, Cd1d, Ly-38
Name
(RefSeq) CD1d1 antigen
  KO
K06448  T-cell surface glycoprotein CD1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04530  Tight junction
mmu04640  Hematopoietic cell lineage
mmu05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    12479 (Cd1d1)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    12479 (Cd1d1)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    12479 (Cd1d1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mmu04090]
    12479 (Cd1d1)
CD molecules [BR:mmu04090]
 Proteins
  12479 (Cd1d1)
SSDB
Motif
Pfam: MHC_I_3 C1-set MHC_I
Other DBs
NCBI-GeneID: 12479
NCBI-ProteinID: NP_031665
MGI: 107674
Ensembl: ENSMUSG00000028076
UniProt: P11609 A0A0R4J090
Structure
Position
3:complement(86903141..86919665)
AA seq 336 aa
MRYLPWLLLWAFLQVWGQSEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSN
DSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSA
GCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQM
LLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMW
MRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWDAR
QAPVGLIVFIVLIMLVVVGAVVYYIWRRRSAYQDIR
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcggtacctaccatggctgttgctgtgggcattcctacaggtctggggacaatctgaa
gcccagcaaaagaattacaccttccgctgcctgcagatgtcttcctttgcaaacagaagc
tggtcccgcacagacagcgtggtctggctgggggatctgcagactcaccgttggagtaat
gactcagccaccatcagcttcacgaagccatggtcccagggcaagttgagtaaccagcag
tgggagaagttgcagcatatgtttcaagtctatcgagtcagctttaccagggacatacag
gaattagtcaaaatgatgtcacctaaagaagactatcccattgagatccagctgtctgcg
ggctgtgaaatgtaccctgggaatgcttcggaaagctttttacacgtagcatttcaagga
aaatatgtcgtgagattctggggaacgtcctggcagacagtcccaggggccccatcttgg
ttagacttgcccatcaaagtgctcaacgctgatcaagggacaagtgcaaccgtgcagatg
ctcctgaatgacacctgccccctatttgtccgtggtctcctagaggcagggaagtcagac
ctagagaagcaagagaagccagtggcctggttgtccagtgtccccagctctgcacatggc
cataggcagctggtgtgtcatgtctctggcttctacccaaaacctgtgtgggtgatgtgg
atgcggggtgaccaggagcaacagggtactcacagaggtgatttcctgccaaatgctgat
gagacatggtatcttcaagcaaccctggatgtggaggctggagaggaagctggcctggcc
tgcagggtgaagcacagcagcctaggaggacaggatatcatcctctactgggatgccagg
caagcacccgtgggcctgatcgtcttcatagtactgatcatgctagtggtggtgggtgct
gtagtctactatatctggagaaggagaagcgcttatcaagacatccggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (27)   
   RefSeq(nuc) (15)   
   GenBank (6)   
   EMBL (6)   
3D Structure (99)   
   PDB (99)   
Protein domain (3)   
   Pfam (3)   
All databases (167)   

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