KEGG   Mus musculus (house mouse): 12554
Entry
12554             CDS       T01002                                 
Symbol
Cdh13, 4932416G01Rik, Cdht, Tcad
Name
(RefSeq) cadherin 13
  KO
K06808  cadherin 13, H-cadherin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    12554 (Cdh13)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    12554 (Cdh13)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    12554 (Cdh13)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Major cadherins
   12554 (Cdh13)
SSDB
Motif
Pfam: Cadherin Cadherin_pro Cadherin_4 Cadherin_3 Big_9 RibLong BACON_2
Other DBs
NCBI-GeneID: 12554
NCBI-ProteinID: NP_062681
MGI: 99551
Ensembl: ENSMUSG00000031841
UniProt: Q9WTR5
Structure
Position
8:119010150..120051668
AA seq 714 aa
MQPRTPLTLCVLLSQVLLVTSADDLECTPGFQRKVLHIHQPAEFIEDQPVLNLTFNDCKG
NEKLHYEVSSPHFKVNSDGTLVALRNITAVGRTLFVHARTPHAEDMAELVIVGGKDIQGS
LQDIFKFARTSPVPRQKRSIVVSPILIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGV
DQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQND
NRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFY
IDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDDKNDHS
PKFTKKEFQATVEEGAVGVIVNLTVEDKDDPTTGAWRAAYTIINGNPGQSFEIHTNPQTN
EGMLSVVKPLDYEISAFHTLLIKVENEDPLVPDVSYGPSSTATVHITVLDVNEGPVFYPD
PMMVTKQENISVGSVLLTVNATDPDSLQHQTIRYSIYKDPAGWLSINPINGTVDTTAVLD
RESPFVHNSVYTALFLAIDSGNPPATGTGTLLITLEDINDNAPVIYPTVAEVCDDARNLS
VVILGASDKDLHPNTDPFKFEIHKQTVPDKVWKISKINNTHALVSLLQNLNKANYNLPIM
VTDSGKPPMTNITDLRVQVCSCKNSKVDCNGAGALHLSLSLLLLFSLLSLLSGL
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgcagccgagaactccgctcaccctgtgcgtcctgctgtcccaggtgctcctggtcacg
tctgcagatgatctggagtgcacccctggattccagcggaaagtgttacacatccaccag
cctgccgaattcatcgaggaccagcctgtcctaaacttgaccttcaatgactgcaagggc
aacgagaagctgcactacgaggtctcaagcccacacttcaaggtgaacagcgacggcacc
ttagtggctctcaggaacatcactgcggtgggcaggaccctgtttgtccatgcgaggact
cctcatgctgaagacatggcagaactcgtgattgtcgggggcaaagacatccagggctcc
ttgcaggatatctttaaatttgcaaggacatctcctgtcccaagacaaaagaggtccatt
gtggtgtcccccatcttgatcccagagaaccagagacagcccttccccagagatgtcggc
aaggtagtcgatagcgacagacccgaagggtccaagttccggctcaccgggaagggagtg
gatcaagaccctaaaggaactttcagaatcaatgagaacacaggcagtgtctccgtgaca
cggaccctggacagagaaacgatcgctacttatcaactgtatgtggaaaccacggatgcc
agtggcaaaactctggaagggccagtgcctctggaagtcattgtgattgaccagaacgac
aacagacccatcttccgggaaggcccttacatcggccatgtcatggaagggtcacccaca
gggaccacggtgatgcggatgacagcgtttgatgcagatgacccggctactgacaatgct
ctcctgaggtacaacatccgtcagcagacgcctgacaagccatctcctaacatgttctac
atcgatcccgagaaaggagacattgtcaccgtggtgtcacctgcgctgctggaccgggag
actctggaaaaccccaagtatgaactgatcatcgaagctcaagatatggcaggattggat
gtcggactgacaggcacagccacagccaccatcgtgatcgatgacaaaaatgatcactca
ccaaaattcaccaagaaagagtttcaagccacagtggaggagggagctgtgggggtcatt
gtcaacttgacagtggaagacaaagacgaccctaccacaggagcctggagggctgcatac
accatcatcaatggaaatcctgggcagagcttcgagatccacaccaacccacagaccaac
gagggcatgctctctgtggtcaagcccctggactatgagatctctgcctttcacaccctg
ctgatcaaagtggagaatgaggacccactggtacccgacgtctcctatggccccagctcc
acggcaactgtccacatcacagtcctggatgtcaacgagggaccagtcttctacccggac
cccatgatggtgactaaacaggagaacatctctgtgggcagtgtgctgctgacagtgaat
gccacagacccagactccctgcaacatcaaactatcaggtactctatctacaaggaccca
gcaggctggctgagtatcaaccccatcaatggaacggtggacaccacagctgtgttggac
cgggagtccccattcgtccacaacagtgtgtacacggccctgttcctggccatcgacagt
ggcaaccctcctgcaactggcaccgggactctgctgataaccctagaggacattaatgac
aacgctcctgtcatttacccaactgtggctgaggtctgcgatgatgccagaaacctcagc
gtggtcattctgggggcttcggacaaggaccttcaccccaacacagaccccttcaagttt
gagattcataaacagacagtccctgataaagtctggaagatctccaaaatcaacaacacc
cacgccctcgtgagccttcttcagaatctgaacaaggcaaactacaacctgcccatcatg
gtgacagattcagggaagccacccatgacgaacatcacggacctcagggtgcaggtgtgc
tcttgcaagaactccaaagtggactgcaacggggctggggccctgcacctcagcctcagc
ttgctgctgctcttctctctcctcagcttattgtcaggtctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (39)   
   RefSeq(nuc) (3)   
   GenBank (18)   
   EMBL (18)   
3D Structure (2)   
   PDB (2)   
Protein domain (7)   
   Pfam (7)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system